==41490== Memcheck, a memory error detector ==41490== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41490== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41490== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41490== Parent PID: 24091 ==41490== ==41490== ==41490== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41490== Open file descriptor 12: ==41490== at 0xC0F307D: pipe (pipe.c:29) ==41490== by 0x1432F07D: ??? ==41490== by 0xFAE94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41490== by 0xB9E1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41490== by 0xB97AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41490== by 0xA671D38: PetscInitialize (pinit.c:924) ==41490== by 0xA5481D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41490== by 0xA548227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41490== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41490== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41490== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41490== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41490== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41490== by 0x138285: main (TestBidomainProblem.cpp:19) ==41490== ==41490== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41490== at 0xC0F7A1C: __open_nocancel (open64_nocancel.c:39) ==41490== by 0xC07BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41490== by 0x8103822: ??? ==41490== by 0x810396F: ??? ==41490== by 0xFB8E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41490== by 0xFB8E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41490== by 0xFB44922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41490== by 0xFAE92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41490== by 0xB9E1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41490== by 0xB97AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41490== by 0xA671D38: PetscInitialize (pinit.c:924) ==41490== by 0xA5481D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41490== by 0xA548227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41490== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41490== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41490== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41490== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41490== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41490== by 0x138285: main (TestBidomainProblem.cpp:19) ==41490== ==41490== Open file descriptor 158: ==41490== ==41490== ==41490== Open file descriptor 155: ==41490== ==41490== ==41490== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41490== ==41490== ==41490== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41490== ==41490== ==41490== ==41490== HEAP SUMMARY: ==41490== in use at exit: 618,814 bytes in 8,248 blocks ==41490== total heap usage: 584,920 allocs, 576,672 frees, 1,548,999,151 bytes allocated ==41490== ==41490== LEAK SUMMARY: ==41490== definitely lost: 0 bytes in 0 blocks ==41490== indirectly lost: 0 bytes in 0 blocks ==41490== possibly lost: 0 bytes in 0 blocks ==41490== still reachable: 24 bytes in 2 blocks ==41490== suppressed: 618,790 bytes in 8,246 blocks ==41490== Reachable blocks (those to which a pointer was found) are not shown. ==41490== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41490== ==41490== For lists of detected and suppressed errors, rerun with: -s ==41490== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 100 from 35)