==25525== Memcheck, a memory error detector ==25525== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25525== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25525== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25525== Parent PID: 24091 ==25525== ==25525== ==25525== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25525== Open file descriptor 12: ==25525== at 0xF84807D: pipe (pipe.c:29) ==25525== by 0x196FB07D: ??? ==25525== by 0x14D0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25525== by 0x114A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25525== by 0x1143DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25525== by 0x10134D38: PetscInitialize (pinit.c:924) ==25525== by 0xF14B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25525== by 0xF14B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25525== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25525== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25525== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25525== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25525== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25525== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25525== ==25525== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25525== at 0xF84CA1C: __open_nocancel (open64_nocancel.c:39) ==25525== by 0xF7D0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25525== by 0xF186822: ??? ==25525== by 0xF18696F: ??? ==25525== by 0x14DAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25525== by 0x14DAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25525== by 0x14D65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25525== by 0x14D0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25525== by 0x114A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25525== by 0x1143DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25525== by 0x10134D38: PetscInitialize (pinit.c:924) ==25525== by 0xF14B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25525== by 0xF14B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25525== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25525== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25525== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25525== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25525== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25525== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25525== ==25525== Open file descriptor 158: ==25525== ==25525== ==25525== Open file descriptor 155: ==25525== ==25525== ==25525== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25525== ==25525== ==25525== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25525== ==25525== ==25525== ==25525== HEAP SUMMARY: ==25525== in use at exit: 618,414 bytes in 8,240 blocks ==25525== total heap usage: 69,389 allocs, 61,149 frees, 1,340,712,132 bytes allocated ==25525== ==25525== LEAK SUMMARY: ==25525== definitely lost: 0 bytes in 0 blocks ==25525== indirectly lost: 0 bytes in 0 blocks ==25525== possibly lost: 0 bytes in 0 blocks ==25525== still reachable: 120 bytes in 4 blocks ==25525== suppressed: 618,294 bytes in 8,236 blocks ==25525== Reachable blocks (those to which a pointer was found) are not shown. ==25525== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25525== ==25525== For lists of detected and suppressed errors, rerun with: -s ==25525== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)