==41506== Memcheck, a memory error detector ==41506== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41506== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41506== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==41506== Parent PID: 24105 ==41506== ==41506== ==41506== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41506== Open file descriptor 12: ==41506== at 0xBC1107D: pipe (pipe.c:29) ==41506== by 0x1433107D: ??? ==41506== by 0xFAE94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41506== by 0xB4FF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41506== by 0xB498D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41506== by 0xA16CD38: PetscInitialize (pinit.c:924) ==41506== by 0xA0431D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41506== by 0xA043227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41506== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41506== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41506== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41506== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41506== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41506== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41506== ==41506== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41506== at 0xBC15A1C: __open_nocancel (open64_nocancel.c:39) ==41506== by 0xBB99BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41506== by 0xB3FC822: ??? ==41506== by 0xB3FC96F: ??? ==41506== by 0xFB906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41506== by 0xFB90938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41506== by 0xFB46922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41506== by 0xFAE92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41506== by 0xB4FF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41506== by 0xB498D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41506== by 0xA16CD38: PetscInitialize (pinit.c:924) ==41506== by 0xA0431D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41506== by 0xA043227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41506== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41506== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41506== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41506== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41506== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41506== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41506== ==41506== Open file descriptor 158: ==41506== ==41506== ==41506== Open file descriptor 155: ==41506== ==41506== ==41506== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==41506== ==41506== ==41506== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41506== ==41506== ==41506== ==41506== HEAP SUMMARY: ==41506== in use at exit: 618,814 bytes in 8,248 blocks ==41506== total heap usage: 428,254 allocs, 420,006 frees, 1,437,409,604 bytes allocated ==41506== ==41506== LEAK SUMMARY: ==41506== definitely lost: 0 bytes in 0 blocks ==41506== indirectly lost: 0 bytes in 0 blocks ==41506== possibly lost: 0 bytes in 0 blocks ==41506== still reachable: 24 bytes in 2 blocks ==41506== suppressed: 618,790 bytes in 8,246 blocks ==41506== Reachable blocks (those to which a pointer was found) are not shown. ==41506== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41506== ==41506== For lists of detected and suppressed errors, rerun with: -s ==41506== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 55 from 38)