==41517== Memcheck, a memory error detector ==41517== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41517== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41517== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainTissue -malloc_debug -malloc_dump -memory_info ==41517== Parent PID: 24105 ==41517== ==41517== ==41517== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41517== Open file descriptor 12: ==41517== at 0xBBAB07D: pipe (pipe.c:29) ==41517== by 0x1433107D: ??? ==41517== by 0xFB384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41517== by 0xBF28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41517== by 0xBEC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41517== by 0xA260D38: PetscInitialize (pinit.c:924) ==41517== by 0xA0D21D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41517== by 0xA0D2227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41517== by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41517== by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41517== by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41517== by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41517== by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41517== by 0x1326C5: main (TestBidomainTissue.cpp:18) ==41517== ==41517== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41517== at 0xBBAFA1C: __open_nocancel (open64_nocancel.c:39) ==41517== by 0xBB33BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41517== by 0xA10D822: ??? ==41517== by 0xA10D96F: ??? ==41517== by 0xFBDD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41517== by 0xFBDD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41517== by 0xFB93922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41517== by 0xFB382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41517== by 0xBF28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41517== by 0xBEC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41517== by 0xA260D38: PetscInitialize (pinit.c:924) ==41517== by 0xA0D21D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41517== by 0xA0D2227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41517== by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41517== by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41517== by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41517== by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41517== by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41517== by 0x1326C5: main (TestBidomainTissue.cpp:18) ==41517== ==41517== Open file descriptor 158: ==41517== ==41517== ==41517== Open file descriptor 155: ==41517== ==41517== ==41517== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainTissue_valgrind.txt ==41517== ==41517== ==41517== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41517== ==41517== ==41517== ==41517== HEAP SUMMARY: ==41517== in use at exit: 618,334 bytes in 8,238 blocks ==41517== total heap usage: 192,057 allocs, 183,819 frees, 1,381,078,186 bytes allocated ==41517== ==41517== LEAK SUMMARY: ==41517== definitely lost: 0 bytes in 0 blocks ==41517== indirectly lost: 0 bytes in 0 blocks ==41517== possibly lost: 0 bytes in 0 blocks ==41517== still reachable: 24 bytes in 2 blocks ==41517== suppressed: 618,310 bytes in 8,236 blocks ==41517== Reachable blocks (those to which a pointer was found) are not shown. ==41517== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41517== ==41517== For lists of detected and suppressed errors, rerun with: -s ==41517== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)