==25987== Memcheck, a memory error detector ==25987== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25987== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25987== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDeltaNotchOdeSystem -malloc_debug -malloc_dump -memory_info ==25987== Parent PID: 24105 ==25987== ==25987== ==25987== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25987== Open file descriptor 12: ==25987== at 0xEFDB07D: pipe (pipe.c:29) ==25987== by 0x196FD07D: ??? ==25987== by 0x13CA14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25987== by 0xEC28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25987== by 0xEBC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25987== by 0xD8B8D38: PetscInitialize (pinit.c:924) ==25987== by 0xD72A1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25987== by 0xD72A227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25987== by 0x123193: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25987== by 0x11E6C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25987== by 0x120CDC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25987== by 0x120BD8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25987== by 0x1211EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25987== by 0x11CEC5: main (TestDeltaNotchOdeSystem.cpp:18) ==25987== ==25987== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25987== at 0xEFDFA1C: __open_nocancel (open64_nocancel.c:39) ==25987== by 0xEF63BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25987== by 0xD765822: ??? ==25987== by 0xD76596F: ??? ==25987== by 0x13D466DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25987== by 0x13D46938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25987== by 0x13CFC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25987== by 0x13CA12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25987== by 0xEC28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25987== by 0xEBC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25987== by 0xD8B8D38: PetscInitialize (pinit.c:924) ==25987== by 0xD72A1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25987== by 0xD72A227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25987== by 0x123193: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25987== by 0x11E6C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25987== by 0x120CDC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25987== by 0x120BD8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25987== by 0x1211EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25987== by 0x11CEC5: main (TestDeltaNotchOdeSystem.cpp:18) ==25987== ==25987== Open file descriptor 158: ==25987== ==25987== ==25987== Open file descriptor 155: ==25987== ==25987== ==25987== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDeltaNotchOdeSystem_valgrind.txt ==25987== ==25987== ==25987== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25987== ==25987== ==25987== ==25987== HEAP SUMMARY: ==25987== in use at exit: 618,318 bytes in 8,238 blocks ==25987== total heap usage: 53,390 allocs, 45,152 frees, 1,338,956,533 bytes allocated ==25987== ==25987== LEAK SUMMARY: ==25987== definitely lost: 0 bytes in 0 blocks ==25987== indirectly lost: 0 bytes in 0 blocks ==25987== possibly lost: 0 bytes in 0 blocks ==25987== still reachable: 24 bytes in 2 blocks ==25987== suppressed: 618,294 bytes in 8,236 blocks ==25987== Reachable blocks (those to which a pointer was found) are not shown. ==25987== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25987== ==25987== For lists of detected and suppressed errors, rerun with: -s ==25987== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)