==42121== Memcheck, a memory error detector ==42121== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42121== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42121== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==42121== Parent PID: 24105 ==42121== ==42121== ==42121== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42121== Open file descriptor 12: ==42121== at 0x856F07D: pipe (pipe.c:29) ==42121== by 0x1433007D: ??? ==42121== by 0xEE2A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42121== by 0x9C6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42121== by 0x9C03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42121== by 0x88FAD38: PetscInitialize (pinit.c:924) ==42121== by 0x819B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42121== by 0x819B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42121== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42121== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42121== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42121== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42121== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42121== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42121== ==42121== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42121== at 0x8573A1C: __open_nocancel (open64_nocancel.c:39) ==42121== by 0x84F7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42121== by 0x81D6822: ??? ==42121== by 0x81D696F: ??? ==42121== by 0xEED16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42121== by 0xEED1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42121== by 0xEE87922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42121== by 0xEE2A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42121== by 0x9C6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42121== by 0x9C03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42121== by 0x88FAD38: PetscInitialize (pinit.c:924) ==42121== by 0x819B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42121== by 0x819B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42121== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42121== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42121== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42121== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42121== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42121== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42121== ==42121== Open file descriptor 158: ==42121== ==42121== ==42121== Open file descriptor 155: ==42121== ==42121== ==42121== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==42121== ==42121== ==42121== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42121== ==42121== ==42121== ==42121== HEAP SUMMARY: ==42121== in use at exit: 618,334 bytes in 8,238 blocks ==42121== total heap usage: 49,004 allocs, 40,766 frees, 1,338,549,672 bytes allocated ==42121== ==42121== LEAK SUMMARY: ==42121== definitely lost: 0 bytes in 0 blocks ==42121== indirectly lost: 0 bytes in 0 blocks ==42121== possibly lost: 0 bytes in 0 blocks ==42121== still reachable: 24 bytes in 2 blocks ==42121== suppressed: 618,310 bytes in 8,236 blocks ==42121== Reachable blocks (those to which a pointer was found) are not shown. ==42121== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42121== ==42121== For lists of detected and suppressed errors, rerun with: -s ==42121== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)