==43121== Memcheck, a memory error detector ==43121== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43121== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43121== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestRushLarsen -malloc_debug -malloc_dump -memory_info ==43121== Parent PID: 24105 ==43121== ==43121== ==43121== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43121== Open file descriptor 12: ==43121== at 0x9C6807D: pipe (pipe.c:29) ==43121== by 0x1433007D: ??? ==43121== by 0xEE2A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43121== by 0x989B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43121== by 0x9834D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43121== by 0x8508D38: PetscInitialize (pinit.c:924) ==43121== by 0x83DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43121== by 0x83DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43121== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==43121== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43121== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43121== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43121== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43121== by 0x114C35: main (TestRushLarsen.cpp:18) ==43121== ==43121== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43121== at 0x9C6CA1C: __open_nocancel (open64_nocancel.c:39) ==43121== by 0x9BF0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43121== by 0x9798822: ??? ==43121== by 0x979896F: ??? ==43121== by 0xEED16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43121== by 0xEED1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43121== by 0xEE87922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43121== by 0xEE2A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43121== by 0x989B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43121== by 0x9834D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43121== by 0x8508D38: PetscInitialize (pinit.c:924) ==43121== by 0x83DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43121== by 0x83DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43121== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==43121== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43121== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43121== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43121== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43121== by 0x114C35: main (TestRushLarsen.cpp:18) ==43121== ==43121== Open file descriptor 158: ==43121== ==43121== ==43121== Open file descriptor 155: ==43121== ==43121== ==43121== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRushLarsen_valgrind.txt ==43121== ==43121== ==43121== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43121== ==43121== ==43121== ==43121== HEAP SUMMARY: ==43121== in use at exit: 621,814 bytes in 8,242 blocks ==43121== total heap usage: 1,051,895 allocs, 1,043,653 frees, 1,778,866,573 bytes allocated ==43121== ==43121== LEAK SUMMARY: ==43121== definitely lost: 0 bytes in 0 blocks ==43121== indirectly lost: 0 bytes in 0 blocks ==43121== possibly lost: 0 bytes in 0 blocks ==43121== still reachable: 3,575 bytes in 10 blocks ==43121== suppressed: 618,239 bytes in 8,232 blocks ==43121== Reachable blocks (those to which a pointer was found) are not shown. ==43121== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43121== ==43121== For lists of detected and suppressed errors, rerun with: -s ==43121== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)