==39883== Memcheck, a memory error detector ==39883== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39883== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39883== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVolumeTrackingModifier -malloc_debug -malloc_dump -memory_info ==39883== Parent PID: 24105 ==39883== ==39883== ==39883== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39883== Open file descriptor 12: ==39883== at 0xF88B07D: pipe (pipe.c:29) ==39883== by 0x196FC07D: ??? ==39883== by 0x14D0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39883== by 0x114E9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39883== by 0x11482D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39883== by 0x10177D38: PetscInitialize (pinit.c:924) ==39883== by 0xF14C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39883== by 0xF14C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39883== by 0x20235E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39883== by 0x1FA77F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39883== by 0x1FDF12: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39883== by 0x1FDE0D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39883== by 0x1FE421: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39883== by 0x1F8F75: main (TestVolumeTrackingModifier.cpp:18) ==39883== ==39883== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39883== at 0xF88FA1C: __open_nocancel (open64_nocancel.c:39) ==39883== by 0xF813BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39883== by 0xF187822: ??? ==39883== by 0xF18796F: ??? ==39883== by 0x14DAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39883== by 0x14DAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39883== by 0x14D65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39883== by 0x14D0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39883== by 0x114E9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39883== by 0x11482D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39883== by 0x10177D38: PetscInitialize (pinit.c:924) ==39883== by 0xF14C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39883== by 0xF14C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39883== by 0x20235E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39883== by 0x1FA77F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39883== by 0x1FDF12: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39883== by 0x1FDE0D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39883== by 0x1FE421: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39883== by 0x1F8F75: main (TestVolumeTrackingModifier.cpp:18) ==39883== ==39883== Open file descriptor 158: ==39883== ==39883== ==39883== Open file descriptor 155: ==39883== ==39883== ==39883== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVolumeTrackingModifier_valgrind.txt ==39883== ==39883== ==39883== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39883== ==39883== ==39883== ==39883== HEAP SUMMARY: ==39883== in use at exit: 618,295 bytes in 8,236 blocks ==39883== total heap usage: 11,559,329 allocs, 11,551,093 frees, 3,065,479,503 bytes allocated ==39883== ==39883== LEAK SUMMARY: ==39883== definitely lost: 0 bytes in 0 blocks ==39883== indirectly lost: 0 bytes in 0 blocks ==39883== possibly lost: 0 bytes in 0 blocks ==39883== still reachable: 72 bytes in 4 blocks ==39883== suppressed: 618,223 bytes in 8,232 blocks ==39883== Reachable blocks (those to which a pointer was found) are not shown. ==39883== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39883== ==39883== For lists of detected and suppressed errors, rerun with: -s ==39883== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)