==41649== Memcheck, a memory error detector ==41649== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41649== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41649== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestFibreReaderAbilityExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==41649== Parent PID: 24064 ==41649== ==41649== ==41649== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41649== Open file descriptor 12: ==41649== at 0xA7EA07D: pipe (pipe.c:29) ==41649== by 0x1433207D: ??? ==41649== by 0xFB364CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41649== by 0xBEE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41649== by 0xBE7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41649== by 0xAB73D38: PetscInitialize (pinit.c:924) ==41649== by 0xA0D2079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41649== by 0xA0D20C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41649== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41649== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41649== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41649== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41649== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41649== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==41649== ==41649== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41649== at 0xA7EEA1C: __open_nocancel (open64_nocancel.c:39) ==41649== by 0xA772BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41649== by 0xA106822: ??? ==41649== by 0xA10696F: ??? ==41649== by 0xFBDB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41649== by 0xFBDB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41649== by 0xFB91922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41649== by 0xFB362DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41649== by 0xBEE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41649== by 0xBE7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41649== by 0xAB73D38: PetscInitialize (pinit.c:924) ==41649== by 0xA0D2079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41649== by 0xA0D20C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41649== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41649== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41649== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41649== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41649== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41649== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==41649== ==41649== Open file descriptor 158: ==41649== ==41649== ==41649== Open file descriptor 155: ==41649== ==41649== ==41649== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestFibreReaderAbilityExtendedBidomainProblem_valgrind.txt ==41649== ==41649== ==41649== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41649== ==41649== ==41649== ==41649== HEAP SUMMARY: ==41649== in use at exit: 618,350 bytes in 8,238 blocks ==41649== total heap usage: 115,880 allocs, 107,642 frees, 1,342,974,951 bytes allocated ==41649== ==41649== LEAK SUMMARY: ==41649== definitely lost: 0 bytes in 0 blocks ==41649== indirectly lost: 0 bytes in 0 blocks ==41649== possibly lost: 0 bytes in 0 blocks ==41649== still reachable: 24 bytes in 2 blocks ==41649== suppressed: 618,326 bytes in 8,236 blocks ==41649== Reachable blocks (those to which a pointer was found) are not shown. ==41649== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41649== ==41649== For lists of detected and suppressed errors, rerun with: -s ==41649== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)