==41390== Memcheck, a memory error detector ==41390== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41390== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41390== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41390== Parent PID: 24123 ==41390== ==41390== ==41390== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41390== Open file descriptor 12: ==41390== at 0xC0F407D: pipe (pipe.c:29) ==41390== by 0x1433407D: ??? ==41390== by 0xFAEB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41390== by 0xB9E2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41390== by 0xB97BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41390== by 0xA672D38: PetscInitialize (pinit.c:924) ==41390== by 0xA5491D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41390== by 0xA549227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41390== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41390== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41390== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41390== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41390== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41390== by 0x138285: main (TestBidomainProblem.cpp:19) ==41390== ==41390== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41390== at 0xC0F8A1C: __open_nocancel (open64_nocancel.c:39) ==41390== by 0xC07CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41390== by 0x80FD822: ??? ==41390== by 0x80FD96F: ??? ==41390== by 0xFB906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41390== by 0xFB90938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41390== by 0xFB46922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41390== by 0xFAEB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41390== by 0xB9E2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41390== by 0xB97BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41390== by 0xA672D38: PetscInitialize (pinit.c:924) ==41390== by 0xA5491D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41390== by 0xA549227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41390== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41390== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41390== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41390== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41390== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41390== by 0x138285: main (TestBidomainProblem.cpp:19) ==41390== ==41390== Open file descriptor 158: ==41390== ==41390== ==41390== Open file descriptor 155: ==41390== ==41390== ==41390== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41390== ==41390== ==41390== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41390== ==41390== ==41390== ==41390== HEAP SUMMARY: ==41390== in use at exit: 618,834 bytes in 8,248 blocks ==41390== total heap usage: 584,918 allocs, 576,670 frees, 1,548,998,652 bytes allocated ==41390== ==41390== LEAK SUMMARY: ==41390== definitely lost: 0 bytes in 0 blocks ==41390== indirectly lost: 0 bytes in 0 blocks ==41390== possibly lost: 0 bytes in 0 blocks ==41390== still reachable: 24 bytes in 2 blocks ==41390== suppressed: 618,810 bytes in 8,246 blocks ==41390== Reachable blocks (those to which a pointer was found) are not shown. ==41390== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41390== ==41390== For lists of detected and suppressed errors, rerun with: -s ==41390== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)