==39937== Memcheck, a memory error detector ==39937== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39937== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39937== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellKillerTutorial -malloc_debug -malloc_dump -memory_info ==39937== Parent PID: 24123 ==39937== ==39937== ==39937== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39937== Open file descriptor 12: ==39937== at 0x10E2907D: pipe (pipe.c:29) ==39937== by 0x196FF07D: ??? ==39937== by 0x14C6C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39937== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39937== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39937== by 0xF275D38: PetscInitialize (pinit.c:924) ==39937== by 0xF14C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39937== by 0xF14C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39937== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39937== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39937== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39937== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39937== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39937== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39937== ==39937== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39937== at 0x10E2DA1C: __open_nocancel (open64_nocancel.c:39) ==39937== by 0x10DB1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39937== by 0x104FF822: ??? ==39937== by 0x104FF96F: ??? ==39937== by 0x14D116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39937== by 0x14D11938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39937== by 0x14CC7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39937== by 0x14C6C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39937== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39937== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39937== by 0xF275D38: PetscInitialize (pinit.c:924) ==39937== by 0xF14C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39937== by 0xF14C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39937== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39937== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39937== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39937== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39937== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39937== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39937== ==39937== Open file descriptor 158: ==39937== ==39937== ==39937== Open file descriptor 155: ==39937== ==39937== ==39937== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellKillerTutorial_valgrind.txt ==39937== ==39937== ==39937== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39937== ==39937== ==39937== ==39937== HEAP SUMMARY: ==39937== in use at exit: 618,297 bytes in 8,235 blocks ==39937== total heap usage: 2,717,534 allocs, 2,709,299 frees, 1,507,802,338 bytes allocated ==39937== ==39937== LEAK SUMMARY: ==39937== definitely lost: 0 bytes in 0 blocks ==39937== indirectly lost: 0 bytes in 0 blocks ==39937== possibly lost: 0 bytes in 0 blocks ==39937== still reachable: 56 bytes in 3 blocks ==39937== suppressed: 618,241 bytes in 8,232 blocks ==39937== Reachable blocks (those to which a pointer was found) are not shown. ==39937== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39937== ==39937== For lists of detected and suppressed errors, rerun with: -s ==39937== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)