==41882== Memcheck, a memory error detector ==41882== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41882== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41882== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==41882== Parent PID: 24123 ==41882== ==41882== ==41882== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41882== Open file descriptor 12: ==41882== at 0x9C6807D: pipe (pipe.c:29) ==41882== by 0x1433307D: ??? ==41882== by 0xEE2A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41882== by 0x989B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41882== by 0x9834D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41882== by 0x8508D38: PetscInitialize (pinit.c:924) ==41882== by 0x83DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41882== by 0x83DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41882== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41882== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41882== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41882== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41882== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41882== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41882== ==41882== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41882== at 0x9C6CA1C: __open_nocancel (open64_nocancel.c:39) ==41882== by 0x9BF0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41882== by 0x9792822: ??? ==41882== by 0x979296F: ??? ==41882== by 0xEED16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41882== by 0xEED1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41882== by 0xEE87922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41882== by 0xEE2A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41882== by 0x989B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41882== by 0x9834D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41882== by 0x8508D38: PetscInitialize (pinit.c:924) ==41882== by 0x83DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41882== by 0x83DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41882== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41882== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41882== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41882== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41882== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41882== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41882== ==41882== Open file descriptor 158: ==41882== ==41882== ==41882== Open file descriptor 155: ==41882== ==41882== ==41882== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==41882== ==41882== ==41882== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41882== ==41882== ==41882== ==41882== HEAP SUMMARY: ==41882== in use at exit: 618,281 bytes in 8,234 blocks ==41882== total heap usage: 74,027 allocs, 65,793 frees, 1,342,654,260 bytes allocated ==41882== ==41882== LEAK SUMMARY: ==41882== definitely lost: 0 bytes in 0 blocks ==41882== indirectly lost: 0 bytes in 0 blocks ==41882== possibly lost: 0 bytes in 0 blocks ==41882== still reachable: 24 bytes in 2 blocks ==41882== suppressed: 618,257 bytes in 8,232 blocks ==41882== Reachable blocks (those to which a pointer was found) are not shown. ==41882== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41882== ==41882== For lists of detected and suppressed errors, rerun with: -s ==41882== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)