==25603== Memcheck, a memory error detector ==25603== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25603== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25603== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedParabolicPdes -malloc_debug -malloc_dump -memory_info ==25603== Parent PID: 24055 ==25603== ==25603== ==25603== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25603== Open file descriptor 12: ==25603== at 0x10E2907D: pipe (pipe.c:29) ==25603== by 0x196FF07D: ??? ==25603== by 0x14C6C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25603== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25603== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25603== by 0xF275D38: PetscInitialize (pinit.c:924) ==25603== by 0xF14C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25603== by 0xF14C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25603== by 0x12D4E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25603== by 0x12825D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25603== by 0x12ADE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25603== by 0x12AC80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25603== by 0x12B317: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25603== by 0x126685: main (TestCellBasedParabolicPdes.cpp:19) ==25603== ==25603== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25603== at 0x10E2DA1C: __open_nocancel (open64_nocancel.c:39) ==25603== by 0x10DB1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25603== by 0x104FF822: ??? ==25603== by 0x104FF96F: ??? ==25603== by 0x14D116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25603== by 0x14D11938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25603== by 0x14CC7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25603== by 0x14C6C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25603== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25603== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25603== by 0xF275D38: PetscInitialize (pinit.c:924) ==25603== by 0xF14C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25603== by 0xF14C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25603== by 0x12D4E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25603== by 0x12825D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25603== by 0x12ADE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25603== by 0x12AC80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25603== by 0x12B317: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25603== by 0x126685: main (TestCellBasedParabolicPdes.cpp:19) ==25603== ==25603== Open file descriptor 158: ==25603== ==25603== ==25603== Open file descriptor 155: ==25603== ==25603== ==25603== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedParabolicPdes_valgrind.txt ==25603== ==25603== ==25603== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25603== ==25603== ==25603== ==25603== HEAP SUMMARY: ==25603== in use at exit: 618,366 bytes in 8,239 blocks ==25603== total heap usage: 73,443 allocs, 65,204 frees, 1,342,661,264 bytes allocated ==25603== ==25603== LEAK SUMMARY: ==25603== definitely lost: 0 bytes in 0 blocks ==25603== indirectly lost: 0 bytes in 0 blocks ==25603== possibly lost: 0 bytes in 0 blocks ==25603== still reachable: 56 bytes in 3 blocks ==25603== suppressed: 618,310 bytes in 8,236 blocks ==25603== Reachable blocks (those to which a pointer was found) are not shown. ==25603== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25603== ==25603== For lists of detected and suppressed errors, rerun with: -s ==25603== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)