==25582== Memcheck, a memory error detector ==25582== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25582== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25582== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==25582== Parent PID: 24091 ==25582== ==25582== ==25582== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25582== Open file descriptor 12: ==25582== at 0xEFDB07D: pipe (pipe.c:29) ==25582== by 0x1970007D: ??? ==25582== by 0x13CA14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25582== by 0xEBE6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25582== by 0xEB7FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25582== by 0xD853D38: PetscInitialize (pinit.c:924) ==25582== by 0xD72A1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25582== by 0xD72A227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25582== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25582== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25582== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25582== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25582== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25582== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25582== ==25582== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25582== at 0xEFDFA1C: __open_nocancel (open64_nocancel.c:39) ==25582== by 0xEF63BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25582== by 0xEADD822: ??? ==25582== by 0xEADD96F: ??? ==25582== by 0x13D466DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25582== by 0x13D46938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25582== by 0x13CFC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25582== by 0x13CA12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25582== by 0xEBE6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25582== by 0xEB7FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25582== by 0xD853D38: PetscInitialize (pinit.c:924) ==25582== by 0xD72A1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25582== by 0xD72A227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25582== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25582== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25582== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25582== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25582== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25582== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25582== ==25582== Open file descriptor 158: ==25582== ==25582== ==25582== Open file descriptor 155: ==25582== ==25582== ==25582== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==25582== ==25582== ==25582== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25582== ==25582== ==25582== ==25582== HEAP SUMMARY: ==25582== in use at exit: 618,313 bytes in 8,236 blocks ==25582== total heap usage: 4,179,273 allocs, 4,171,037 frees, 1,770,088,007 bytes allocated ==25582== ==25582== LEAK SUMMARY: ==25582== definitely lost: 0 bytes in 0 blocks ==25582== indirectly lost: 0 bytes in 0 blocks ==25582== possibly lost: 0 bytes in 0 blocks ==25582== still reachable: 72 bytes in 4 blocks ==25582== suppressed: 618,241 bytes in 8,232 blocks ==25582== Reachable blocks (those to which a pointer was found) are not shown. ==25582== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25582== ==25582== For lists of detected and suppressed errors, rerun with: -s ==25582== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)