==25773== Memcheck, a memory error detector ==25773== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25773== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25773== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25773== Parent PID: 24097 ==25773== ==25773== ==25773== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25773== Open file descriptor 12: ==25773== at 0x1109D07D: pipe (pipe.c:29) ==25773== by 0x1970007D: ??? ==25773== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25773== by 0x109A5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25773== by 0x1093ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25773== by 0xF612D38: PetscInitialize (pinit.c:924) ==25773== by 0xF4E91D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25773== by 0xF4E9227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25773== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25773== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25773== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25773== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25773== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25773== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==25773== ==25773== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25773== at 0x110A1A1C: __open_nocancel (open64_nocancel.c:39) ==25773== by 0x11025BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25773== by 0x1089C822: ??? ==25773== by 0x1089C96F: ??? ==25773== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25773== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25773== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25773== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25773== by 0x109A5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25773== by 0x1093ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25773== by 0xF612D38: PetscInitialize (pinit.c:924) ==25773== by 0xF4E91D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25773== by 0xF4E9227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25773== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25773== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25773== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25773== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25773== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25773== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==25773== ==25773== Open file descriptor 158: ==25773== ==25773== ==25773== Open file descriptor 155: ==25773== ==25773== ==25773== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithParabolicBoxDomainPdeModifier_valgrind.txt ==25773== ==25773== ==25773== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25773== ==25773== ==25773== ==25773== HEAP SUMMARY: ==25773== in use at exit: 618,295 bytes in 8,235 blocks ==25773== total heap usage: 4,548,701 allocs, 4,540,466 frees, 1,833,984,175 bytes allocated ==25773== ==25773== LEAK SUMMARY: ==25773== definitely lost: 0 bytes in 0 blocks ==25773== indirectly lost: 0 bytes in 0 blocks ==25773== possibly lost: 0 bytes in 0 blocks ==25773== still reachable: 56 bytes in 3 blocks ==25773== suppressed: 618,239 bytes in 8,232 blocks ==25773== Reachable blocks (those to which a pointer was found) are not shown. ==25773== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25773== ==25773== For lists of detected and suppressed errors, rerun with: -s ==25773== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)