==26409== Memcheck, a memory error detector ==26409== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26409== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26409== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDeltaNotchModifier -malloc_debug -malloc_dump -memory_info ==26409== Parent PID: 24127 ==26409== ==26409== ==26409== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26409== Open file descriptor 12: ==26409== at 0xF88B07D: pipe (pipe.c:29) ==26409== by 0x196FF07D: ??? ==26409== by 0x14D0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26409== by 0x114E9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26409== by 0x11482D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26409== by 0x10177D38: PetscInitialize (pinit.c:924) ==26409== by 0xF14C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26409== by 0xF14C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26409== by 0x208508: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26409== by 0x1FFF99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26409== by 0x203992: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26409== by 0x203832: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26409== by 0x203EC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26409== by 0x1FE3B5: main (TestDeltaNotchModifier.cpp:19) ==26409== ==26409== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26409== at 0xF88FA1C: __open_nocancel (open64_nocancel.c:39) ==26409== by 0xF813BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26409== by 0xF181822: ??? ==26409== by 0xF18196F: ??? ==26409== by 0x14DAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26409== by 0x14DAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26409== by 0x14D65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26409== by 0x14D0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26409== by 0x114E9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26409== by 0x11482D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26409== by 0x10177D38: PetscInitialize (pinit.c:924) ==26409== by 0xF14C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26409== by 0xF14C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26409== by 0x208508: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26409== by 0x1FFF99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26409== by 0x203992: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26409== by 0x203832: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26409== by 0x203EC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26409== by 0x1FE3B5: main (TestDeltaNotchModifier.cpp:19) ==26409== ==26409== Open file descriptor 158: ==26409== ==26409== ==26409== Open file descriptor 155: ==26409== ==26409== ==26409== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDeltaNotchModifier_valgrind.txt ==26409== ==26409== ==26409== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26409== ==26409== ==26409== ==26409== HEAP SUMMARY: ==26409== in use at exit: 618,297 bytes in 8,235 blocks ==26409== total heap usage: 5,587,360 allocs, 5,579,125 frees, 8,884,055,962 bytes allocated ==26409== ==26409== LEAK SUMMARY: ==26409== definitely lost: 0 bytes in 0 blocks ==26409== indirectly lost: 0 bytes in 0 blocks ==26409== possibly lost: 0 bytes in 0 blocks ==26409== still reachable: 56 bytes in 3 blocks ==26409== suppressed: 618,241 bytes in 8,232 blocks ==26409== Reachable blocks (those to which a pointer was found) are not shown. ==26409== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26409== ==26409== For lists of detected and suppressed errors, rerun with: -s ==26409== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)