==25945== Memcheck, a memory error detector ==25945== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25945== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25945== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationTime -malloc_debug -malloc_dump -memory_info ==25945== Parent PID: 24127 ==25945== ==25945== ==25945== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25945== Open file descriptor 12: ==25945== at 0xD8E207D: pipe (pipe.c:29) ==25945== by 0x196FF07D: ??? ==25945== by 0x14CBE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25945== by 0x111A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25945== by 0x1113BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25945== by 0xFE32D38: PetscInitialize (pinit.c:924) ==25945== by 0xD4E61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25945== by 0xD4E6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25945== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25945== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25945== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25945== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25945== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25945== by 0x154225: main (TestSimulationTime.cpp:19) ==25945== ==25945== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25945== at 0xD8E6A1C: __open_nocancel (open64_nocancel.c:39) ==25945== by 0xD86ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25945== by 0xD51B822: ??? ==25945== by 0xD51B96F: ??? ==25945== by 0x14D636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25945== by 0x14D63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25945== by 0x14D19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25945== by 0x14CBE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25945== by 0x111A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25945== by 0x1113BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25945== by 0xFE32D38: PetscInitialize (pinit.c:924) ==25945== by 0xD4E61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25945== by 0xD4E6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25945== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25945== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25945== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25945== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25945== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25945== by 0x154225: main (TestSimulationTime.cpp:19) ==25945== ==25945== Open file descriptor 158: ==25945== ==25945== ==25945== Open file descriptor 155: ==25945== ==25945== ==25945== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationTime_valgrind.txt ==25945== ==25945== ==25945== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25945== ==25945== ==25945== ==25945== HEAP SUMMARY: ==25945== in use at exit: 618,338 bytes in 8,238 blocks ==25945== total heap usage: 53,176 allocs, 44,938 frees, 1,338,934,341 bytes allocated ==25945== ==25945== LEAK SUMMARY: ==25945== definitely lost: 0 bytes in 0 blocks ==25945== indirectly lost: 0 bytes in 0 blocks ==25945== possibly lost: 0 bytes in 0 blocks ==25945== still reachable: 24 bytes in 2 blocks ==25945== suppressed: 618,314 bytes in 8,236 blocks ==25945== Reachable blocks (those to which a pointer was found) are not shown. ==25945== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25945== ==25945== For lists of detected and suppressed errors, rerun with: -s ==25945== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)