==40655== Memcheck, a memory error detector ==40655== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40655== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40655== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntConcentration -malloc_debug -malloc_dump -memory_info ==40655== Parent PID: 24127 ==40655== ==40655== ==40655== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40655== Open file descriptor 12: ==40655== at 0x126E907D: pipe (pipe.c:29) ==40655== by 0x1B3C107D: ??? ==40655== by 0x165234CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40655== by 0x11F0A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40655== by 0x11EA3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40655== by 0x10B9AD38: PetscInitialize (pinit.c:924) ==40655== by 0x10A711D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40655== by 0x10A71227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40655== by 0x1449B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40655== by 0x13F409: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40655== by 0x14221A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40655== by 0x1420BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40655== by 0x142751: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40655== by 0x13D825: main (TestWntConcentration.cpp:19) ==40655== ==40655== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40655== at 0x126EDA1C: __open_nocancel (open64_nocancel.c:39) ==40655== by 0x12671BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40655== by 0x611C822: ??? ==40655== by 0x611C96F: ??? ==40655== by 0x165CA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40655== by 0x165CA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40655== by 0x16580922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40655== by 0x165232DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40655== by 0x11F0A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40655== by 0x11EA3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40655== by 0x10B9AD38: PetscInitialize (pinit.c:924) ==40655== by 0x10A711D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40655== by 0x10A71227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40655== by 0x1449B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40655== by 0x13F409: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40655== by 0x14221A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40655== by 0x1420BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40655== by 0x142751: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40655== by 0x13D825: main (TestWntConcentration.cpp:19) ==40655== ==40655== Open file descriptor 158: ==40655== ==40655== ==40655== Open file descriptor 155: ==40655== ==40655== ==40655== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntConcentration_valgrind.txt ==40655== ==40655== ==40655== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40655== ==40655== ==40655== ==40655== HEAP SUMMARY: ==40655== in use at exit: 618,466 bytes in 8,240 blocks ==40655== total heap usage: 56,651 allocs, 48,411 frees, 1,340,197,383 bytes allocated ==40655== ==40655== LEAK SUMMARY: ==40655== definitely lost: 0 bytes in 0 blocks ==40655== indirectly lost: 0 bytes in 0 blocks ==40655== possibly lost: 0 bytes in 0 blocks ==40655== still reachable: 136 bytes in 4 blocks ==40655== suppressed: 618,330 bytes in 8,236 blocks ==40655== Reachable blocks (those to which a pointer was found) are not shown. ==40655== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40655== ==40655== For lists of detected and suppressed errors, rerun with: -s ==40655== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)