==25666== Memcheck, a memory error detector ==25666== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25666== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25666== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25666== Parent PID: 24049 ==25666== ==25666== ==25666== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25666== Open file descriptor 12: ==25666== at 0x1109C07D: pipe (pipe.c:29) ==25666== by 0x196FE07D: ??? ==25666== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25666== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25666== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25666== by 0xF611D38: PetscInitialize (pinit.c:924) ==25666== by 0xF4E9079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25666== by 0xF4E90C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25666== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25666== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25666== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25666== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25666== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25666== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25666== ==25666== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25666== at 0x110A0A1C: __open_nocancel (open64_nocancel.c:39) ==25666== by 0x11024BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25666== by 0x108A6822: ??? ==25666== by 0x108A696F: ??? ==25666== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25666== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25666== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25666== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25666== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25666== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25666== by 0xF611D38: PetscInitialize (pinit.c:924) ==25666== by 0xF4E9079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25666== by 0xF4E90C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25666== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25666== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25666== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25666== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25666== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25666== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25666== ==25666== Open file descriptor 158: ==25666== ==25666== ==25666== Open file descriptor 155: ==25666== ==25666== ==25666== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==25666== ==25666== ==25666== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp37542 ==25666== ==25666== ==25666== ==25666== HEAP SUMMARY: ==25666== in use at exit: 618,297 bytes in 8,235 blocks ==25666== total heap usage: 7,864,884 allocs, 7,856,649 frees, 2,188,607,680 bytes allocated ==25666== ==25666== LEAK SUMMARY: ==25666== definitely lost: 0 bytes in 0 blocks ==25666== indirectly lost: 0 bytes in 0 blocks ==25666== possibly lost: 0 bytes in 0 blocks ==25666== still reachable: 56 bytes in 3 blocks ==25666== suppressed: 618,241 bytes in 8,232 blocks ==25666== Reachable blocks (those to which a pointer was found) are not shown. ==25666== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25666== ==25666== For lists of detected and suppressed errors, rerun with: -s ==25666== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)