==25989== Memcheck, a memory error detector ==25989== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25989== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25989== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationTime -malloc_debug -malloc_dump -memory_info ==25989== Parent PID: 24171 ==25989== ==25989== ==25989== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25989== Open file descriptor 12: ==25989== at 0xD8E107D: pipe (pipe.c:29) ==25989== by 0x196FF07D: ??? ==25989== by 0x14CBE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25989== by 0x111A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25989== by 0x1113AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25989== by 0xFE31D38: PetscInitialize (pinit.c:924) ==25989== by 0xD4E6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25989== by 0xD4E60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25989== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25989== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25989== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25989== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25989== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25989== by 0x154225: main (TestSimulationTime.cpp:19) ==25989== ==25989== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25989== at 0xD8E5A1C: __open_nocancel (open64_nocancel.c:39) ==25989== by 0xD869BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25989== by 0xD51A822: ??? ==25989== by 0xD51A96F: ??? ==25989== by 0x14D636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25989== by 0x14D63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25989== by 0x14D19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25989== by 0x14CBE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25989== by 0x111A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25989== by 0x1113AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25989== by 0xFE31D38: PetscInitialize (pinit.c:924) ==25989== by 0xD4E6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25989== by 0xD4E60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25989== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25989== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25989== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25989== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25989== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25989== by 0x154225: main (TestSimulationTime.cpp:19) ==25989== ==25989== Open file descriptor 158: ==25989== ==25989== ==25989== Open file descriptor 155: ==25989== ==25989== ==25989== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationTime_valgrind.txt ==25989== ==25989== ==25989== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25989== ==25989== ==25989== ==25989== HEAP SUMMARY: ==25989== in use at exit: 618,338 bytes in 8,238 blocks ==25989== total heap usage: 53,175 allocs, 44,937 frees, 1,338,934,119 bytes allocated ==25989== ==25989== LEAK SUMMARY: ==25989== definitely lost: 0 bytes in 0 blocks ==25989== indirectly lost: 0 bytes in 0 blocks ==25989== possibly lost: 0 bytes in 0 blocks ==25989== still reachable: 24 bytes in 2 blocks ==25989== suppressed: 618,314 bytes in 8,236 blocks ==25989== Reachable blocks (those to which a pointer was found) are not shown. ==25989== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25989== ==25989== For lists of detected and suppressed errors, rerun with: -s ==25989== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)