==25721== Memcheck, a memory error detector ==25721== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25721== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25721== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdes -malloc_debug -malloc_dump -memory_info ==25721== Parent PID: 24180 ==25721== ==25721== ==25721== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25721== Open file descriptor 12: ==25721== at 0x10E4407D: pipe (pipe.c:29) ==25721== by 0x1971707D: ??? ==25721== by 0x14C7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25721== by 0x10623418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25721== by 0x105BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25721== by 0xF290D38: PetscInitialize (pinit.c:924) ==25721== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25721== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25721== by 0x12D4A3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25721== by 0x12821D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25721== by 0x12ADA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25721== by 0x12AC40: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25721== by 0x12B2D7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25721== by 0x126645: main (TestCellBasedEllipticPdes.cpp:19) ==25721== ==25721== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25721== at 0x10E48A1C: __open_nocancel (open64_nocancel.c:39) ==25721== by 0x10DCCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25721== by 0x10520822: ??? ==25721== by 0x1052096F: ??? ==25721== by 0x14D246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25721== by 0x14D24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25721== by 0x14CDA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25721== by 0x14C7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25721== by 0x10623418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25721== by 0x105BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25721== by 0xF290D38: PetscInitialize (pinit.c:924) ==25721== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25721== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25721== by 0x12D4A3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25721== by 0x12821D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25721== by 0x12ADA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25721== by 0x12AC40: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25721== by 0x12B2D7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25721== by 0x126645: main (TestCellBasedEllipticPdes.cpp:19) ==25721== ==25721== Open file descriptor 158: ==25721== ==25721== ==25721== Open file descriptor 155: ==25721== ==25721== ==25721== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdes_valgrind.txt ==25721== ==25721== ==25721== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25721== ==25721== ==25721== ==25721== HEAP SUMMARY: ==25721== in use at exit: 618,419 bytes in 8,240 blocks ==25721== total heap usage: 75,762 allocs, 67,522 frees, 1,343,391,874 bytes allocated ==25721== ==25721== LEAK SUMMARY: ==25721== definitely lost: 0 bytes in 0 blocks ==25721== indirectly lost: 0 bytes in 0 blocks ==25721== possibly lost: 0 bytes in 0 blocks ==25721== still reachable: 56 bytes in 3 blocks ==25721== suppressed: 618,363 bytes in 8,237 blocks ==25721== Reachable blocks (those to which a pointer was found) are not shown. ==25721== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25721== ==25721== For lists of detected and suppressed errors, rerun with: -s ==25721== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)