==25159== Memcheck, a memory error detector ==25159== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25159== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25159== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestCombinedOdeSystem -malloc_debug -malloc_dump -memory_info ==25159== Parent PID: 24180 ==25159== ==25159== ==25159== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25159== Open file descriptor 12: ==25159== at 0x4F1007D: pipe (pipe.c:29) ==25159== by 0xB1E607D: ??? ==25159== by 0x8CDE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25159== by 0x6678418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25159== by 0x6611D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25159== by 0x5308D38: PetscInitialize (pinit.c:924) ==25159== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25159== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25159== by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25159== by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25159== by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25159== by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25159== by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25159== by 0x118A75: main (TestCombinedOdeSystem.cpp:18) ==25159== ==25159== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25159== at 0x4F14A1C: __open_nocancel (open64_nocancel.c:39) ==25159== by 0x4E98BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25159== by 0x4B77822: ??? ==25159== by 0x4B7796F: ??? ==25159== by 0x8D836DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25159== by 0x8D83938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25159== by 0x8D39922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25159== by 0x8CDE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25159== by 0x6678418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25159== by 0x6611D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25159== by 0x5308D38: PetscInitialize (pinit.c:924) ==25159== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25159== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25159== by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25159== by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25159== by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25159== by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25159== by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25159== by 0x118A75: main (TestCombinedOdeSystem.cpp:18) ==25159== ==25159== Open file descriptor 158: ==25159== ==25159== ==25159== Open file descriptor 155: ==25159== ==25159== ==25159== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCombinedOdeSystem_valgrind.txt ==25159== ==25159== ==25159== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25159== ==25159== ==25159== ==25159== HEAP SUMMARY: ==25159== in use at exit: 617,971 bytes in 8,239 blocks ==25159== total heap usage: 46,093 allocs, 37,854 frees, 1,338,600,813 bytes allocated ==25159== ==25159== LEAK SUMMARY: ==25159== definitely lost: 0 bytes in 0 blocks ==25159== indirectly lost: 0 bytes in 0 blocks ==25159== possibly lost: 0 bytes in 0 blocks ==25159== still reachable: 24 bytes in 2 blocks ==25159== suppressed: 617,947 bytes in 8,237 blocks ==25159== Reachable blocks (those to which a pointer was found) are not shown. ==25159== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25159== ==25159== For lists of detected and suppressed errors, rerun with: -s ==25159== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)