==25445== Memcheck, a memory error detector ==25445== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25445== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25445== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==25445== Parent PID: 24180 ==25445== ==25445== ==25445== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25445== Open file descriptor 12: ==25445== at 0x734E07D: pipe (pipe.c:29) ==25445== by 0x104DE07D: ??? ==25445== by 0xC6124CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25445== by 0x8D80418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25445== by 0x8D19D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25445== by 0x765BD38: PetscInitialize (pinit.c:924) ==25445== by 0x68FD1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25445== by 0x68FD227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25445== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25445== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25445== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25445== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25445== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25445== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25445== ==25445== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25445== at 0x7352A1C: __open_nocancel (open64_nocancel.c:39) ==25445== by 0x72D6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25445== by 0x6938822: ??? ==25445== by 0x693896F: ??? ==25445== by 0xC6B76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25445== by 0xC6B7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25445== by 0xC66D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25445== by 0xC6122DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25445== by 0x8D80418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25445== by 0x8D19D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25445== by 0x765BD38: PetscInitialize (pinit.c:924) ==25445== by 0x68FD1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25445== by 0x68FD227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25445== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25445== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25445== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25445== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25445== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25445== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25445== ==25445== Open file descriptor 158: ==25445== ==25445== ==25445== Open file descriptor 155: ==25445== ==25445== ==25445== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==25445== ==25445== ==25445== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25445== ==25445== ==25445== ==25445== HEAP SUMMARY: ==25445== in use at exit: 618,323 bytes in 8,239 blocks ==25445== total heap usage: 206,015 allocs, 197,776 frees, 1,394,813,365 bytes allocated ==25445== ==25445== LEAK SUMMARY: ==25445== definitely lost: 0 bytes in 0 blocks ==25445== indirectly lost: 0 bytes in 0 blocks ==25445== possibly lost: 0 bytes in 0 blocks ==25445== still reachable: 24 bytes in 2 blocks ==25445== suppressed: 618,299 bytes in 8,237 blocks ==25445== Reachable blocks (those to which a pointer was found) are not shown. ==25445== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25445== ==25445== For lists of detected and suppressed errors, rerun with: -s ==25445== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)