==26353== Memcheck, a memory error detector ==26353== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26353== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26353== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==26353== Parent PID: 24180 ==26353== ==26353== ==26353== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26353== Open file descriptor 12: ==26353== at 0xF8A607D: pipe (pipe.c:29) ==26353== by 0x1971707D: ??? ==26353== by 0x14D1D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26353== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26353== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26353== by 0x10192D38: PetscInitialize (pinit.c:924) ==26353== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26353== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26353== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26353== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26353== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26353== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26353== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26353== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==26353== ==26353== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26353== at 0xF8AAA1C: __open_nocancel (open64_nocancel.c:39) ==26353== by 0xF82EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26353== by 0xF1A2822: ??? ==26353== by 0xF1A296F: ??? ==26353== by 0x14DC26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26353== by 0x14DC2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26353== by 0x14D78922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26353== by 0x14D1D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26353== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26353== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26353== by 0x10192D38: PetscInitialize (pinit.c:924) ==26353== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26353== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26353== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26353== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26353== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26353== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26353== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26353== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==26353== ==26353== Open file descriptor 158: ==26353== ==26353== ==26353== Open file descriptor 155: ==26353== ==26353== ==26353== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==26353== ==26353== ==26353== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26353== ==26353== ==26353== ==26353== HEAP SUMMARY: ==26353== in use at exit: 618,419 bytes in 8,240 blocks ==26353== total heap usage: 57,253 allocs, 49,013 frees, 1,340,573,690 bytes allocated ==26353== ==26353== LEAK SUMMARY: ==26353== definitely lost: 0 bytes in 0 blocks ==26353== indirectly lost: 0 bytes in 0 blocks ==26353== possibly lost: 0 bytes in 0 blocks ==26353== still reachable: 56 bytes in 3 blocks ==26353== suppressed: 618,363 bytes in 8,237 blocks ==26353== Reachable blocks (those to which a pointer was found) are not shown. ==26353== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26353== ==26353== For lists of detected and suppressed errors, rerun with: -s ==26353== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)