==25683== Memcheck, a memory error detector ==25683== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25683== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25683== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==25683== Parent PID: 24180 ==25683== ==25683== ==25683== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25683== Open file descriptor 12: ==25683== at 0xEDB207D: pipe (pipe.c:29) ==25683== by 0x1971707D: ??? ==25683== by 0x13C6B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25683== by 0xE9BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25683== by 0xE958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25683== by 0xD62CD38: PetscInitialize (pinit.c:924) ==25683== by 0xD5011D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25683== by 0xD501227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25683== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25683== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25683== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25683== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25683== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25683== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25683== ==25683== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25683== at 0xEDB6A1C: __open_nocancel (open64_nocancel.c:39) ==25683== by 0xED3ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25683== by 0xE8BC822: ??? ==25683== by 0xE8BC96F: ??? ==25683== by 0x13D106DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25683== by 0x13D10938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25683== by 0x13CC6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25683== by 0x13C6B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25683== by 0xE9BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25683== by 0xE958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25683== by 0xD62CD38: PetscInitialize (pinit.c:924) ==25683== by 0xD5011D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25683== by 0xD501227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25683== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25683== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25683== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25683== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25683== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25683== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25683== ==25683== Open file descriptor 158: ==25683== ==25683== ==25683== Open file descriptor 155: ==25683== ==25683== ==25683== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==25683== ==25683== ==25683== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25683== ==25683== ==25683== ==25683== HEAP SUMMARY: ==25683== in use at exit: 618,435 bytes in 8,241 blocks ==25683== total heap usage: 57,218 allocs, 48,977 frees, 1,339,818,855 bytes allocated ==25683== ==25683== LEAK SUMMARY: ==25683== definitely lost: 0 bytes in 0 blocks ==25683== indirectly lost: 0 bytes in 0 blocks ==25683== possibly lost: 0 bytes in 0 blocks ==25683== still reachable: 72 bytes in 4 blocks ==25683== suppressed: 618,363 bytes in 8,237 blocks ==25683== Reachable blocks (those to which a pointer was found) are not shown. ==25683== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25683== ==25683== For lists of detected and suppressed errors, rerun with: -s ==25683== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)