==26406== Memcheck, a memory error detector ==26406== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26406== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26406== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26406== Parent PID: 24180 ==26406== ==26406== ==26406== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26406== Open file descriptor 12: ==26406== at 0xF0F907D: pipe (pipe.c:29) ==26406== by 0x1971707D: ??? ==26406== by 0x13C6B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26406== by 0xE9BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26406== by 0xE958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26406== by 0xD62CD38: PetscInitialize (pinit.c:924) ==26406== by 0xD5011D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26406== by 0xD501227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26406== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26406== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26406== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26406== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26406== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26406== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26406== ==26406== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26406== at 0xF0FDA1C: __open_nocancel (open64_nocancel.c:39) ==26406== by 0xF081BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26406== by 0xE8BC822: ??? ==26406== by 0xE8BC96F: ??? ==26406== by 0x13D106DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26406== by 0x13D10938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26406== by 0x13CC6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26406== by 0x13C6B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26406== by 0xE9BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26406== by 0xE958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26406== by 0xD62CD38: PetscInitialize (pinit.c:924) ==26406== by 0xD5011D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26406== by 0xD501227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26406== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26406== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26406== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26406== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26406== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26406== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26406== ==26406== Open file descriptor 158: ==26406== ==26406== ==26406== Open file descriptor 155: ==26406== ==26406== ==26406== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26406== ==26406== ==26406== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26406== ==26406== ==26406== ==26406== HEAP SUMMARY: ==26406== in use at exit: 618,419 bytes in 8,240 blocks ==26406== total heap usage: 67,504 allocs, 59,264 frees, 1,340,323,651 bytes allocated ==26406== ==26406== LEAK SUMMARY: ==26406== definitely lost: 0 bytes in 0 blocks ==26406== indirectly lost: 0 bytes in 0 blocks ==26406== possibly lost: 0 bytes in 0 blocks ==26406== still reachable: 56 bytes in 3 blocks ==26406== suppressed: 618,363 bytes in 8,237 blocks ==26406== Reachable blocks (those to which a pointer was found) are not shown. ==26406== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26406== ==26406== For lists of detected and suppressed errors, rerun with: -s ==26406== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)