==41561== Memcheck, a memory error detector ==41561== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41561== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41561== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41561== Parent PID: 24093 ==41561== ==41561== ==41561== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41561== Open file descriptor 12: ==41561== at 0xC0F407D: pipe (pipe.c:29) ==41561== by 0x1433107D: ??? ==41561== by 0xFAEB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41561== by 0xB9E2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41561== by 0xB97BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41561== by 0xA672D38: PetscInitialize (pinit.c:924) ==41561== by 0xA5491D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41561== by 0xA549227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41561== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41561== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41561== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41561== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41561== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41561== by 0x138285: main (TestBidomainProblem.cpp:19) ==41561== ==41561== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41561== at 0xC0F8A1C: __open_nocancel (open64_nocancel.c:39) ==41561== by 0xC07CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41561== by 0x8103822: ??? ==41561== by 0x810396F: ??? ==41561== by 0xFB906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41561== by 0xFB90938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41561== by 0xFB46922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41561== by 0xFAEB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41561== by 0xB9E2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41561== by 0xB97BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41561== by 0xA672D38: PetscInitialize (pinit.c:924) ==41561== by 0xA5491D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41561== by 0xA549227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41561== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41561== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41561== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41561== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41561== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41561== by 0x138285: main (TestBidomainProblem.cpp:19) ==41561== ==41561== Open file descriptor 158: ==41561== ==41561== ==41561== Open file descriptor 155: ==41561== ==41561== ==41561== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41561== ==41561== ==41561== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41561== ==41561== ==41561== ==41561== HEAP SUMMARY: ==41561== in use at exit: 618,883 bytes in 8,249 blocks ==41561== total heap usage: 584,919 allocs, 576,670 frees, 1,549,324,849 bytes allocated ==41561== ==41561== LEAK SUMMARY: ==41561== definitely lost: 0 bytes in 0 blocks ==41561== indirectly lost: 0 bytes in 0 blocks ==41561== possibly lost: 0 bytes in 0 blocks ==41561== still reachable: 24 bytes in 2 blocks ==41561== suppressed: 618,859 bytes in 8,247 blocks ==41561== Reachable blocks (those to which a pointer was found) are not shown. ==41561== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41561== ==41561== For lists of detected and suppressed errors, rerun with: -s ==41561== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)