==25639== Memcheck, a memory error detector ==25639== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25639== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25639== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdeSolver -malloc_debug -malloc_dump -memory_info ==25639== Parent PID: 24093 ==25639== ==25639== ==25639== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25639== Open file descriptor 12: ==25639== at 0x110F707D: pipe (pipe.c:29) ==25639== by 0x1971807D: ??? ==25639== by 0x14D204CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25639== by 0x115A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25639== by 0x11542D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25639== by 0xF6BCD38: PetscInitialize (pinit.c:924) ==25639== by 0xF5931D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25639== by 0xF593227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25639== by 0x13C922: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25639== by 0x137A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25639== by 0x13A5DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25639== by 0x13A4D5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25639== by 0x13AAE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25639== by 0x136235: main (TestCellBasedEllipticPdeSolver.cpp:18) ==25639== ==25639== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25639== at 0x110FBA1C: __open_nocancel (open64_nocancel.c:39) ==25639== by 0x1107FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25639== by 0x1094C822: ??? ==25639== by 0x1094C96F: ??? ==25639== by 0x14DC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25639== by 0x14DC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25639== by 0x14D7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25639== by 0x14D202DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25639== by 0x115A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25639== by 0x11542D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25639== by 0xF6BCD38: PetscInitialize (pinit.c:924) ==25639== by 0xF5931D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25639== by 0xF593227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25639== by 0x13C922: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25639== by 0x137A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25639== by 0x13A5DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25639== by 0x13A4D5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25639== by 0x13AAE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25639== by 0x136235: main (TestCellBasedEllipticPdeSolver.cpp:18) ==25639== ==25639== Open file descriptor 158: ==25639== ==25639== ==25639== Open file descriptor 155: ==25639== ==25639== ==25639== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdeSolver_valgrind.txt ==25639== ==25639== ==25639== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25639== ==25639== ==25639== ==25639== HEAP SUMMARY: ==25639== in use at exit: 618,387 bytes in 8,239 blocks ==25639== total heap usage: 55,352 allocs, 47,113 frees, 1,339,784,742 bytes allocated ==25639== ==25639== LEAK SUMMARY: ==25639== definitely lost: 0 bytes in 0 blocks ==25639== indirectly lost: 0 bytes in 0 blocks ==25639== possibly lost: 0 bytes in 0 blocks ==25639== still reachable: 24 bytes in 2 blocks ==25639== suppressed: 618,363 bytes in 8,237 blocks ==25639== Reachable blocks (those to which a pointer was found) are not shown. ==25639== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25639== ==25639== For lists of detected and suppressed errors, rerun with: -s ==25639== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)