==40219== Memcheck, a memory error detector ==40219== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40219== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40219== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingNewCellBasedWritersTutorial -malloc_debug -malloc_dump -memory_info ==40219== Parent PID: 24093 ==40219== ==40219== ==40219== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40219== Open file descriptor 12: ==40219== at 0xF8A607D: pipe (pipe.c:29) ==40219== by 0x1971707D: ??? ==40219== by 0x14D1D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40219== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40219== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40219== by 0x10192D38: PetscInitialize (pinit.c:924) ==40219== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40219== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40219== by 0x1B8DC8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40219== by 0x1B2CFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40219== by 0x1B669A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40219== by 0x1B6596: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40219== by 0x1B6BA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40219== by 0x1B14F5: main (TestCreatingAndUsingNewCellBasedWritersTutorial.cpp:18) ==40219== ==40219== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40219== at 0xF8AAA1C: __open_nocancel (open64_nocancel.c:39) ==40219== by 0xF82EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40219== by 0xF1A2822: ??? ==40219== by 0xF1A296F: ??? ==40219== by 0x14DC26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40219== by 0x14DC2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40219== by 0x14D78922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40219== by 0x14D1D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40219== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40219== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40219== by 0x10192D38: PetscInitialize (pinit.c:924) ==40219== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40219== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40219== by 0x1B8DC8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40219== by 0x1B2CFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40219== by 0x1B669A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40219== by 0x1B6596: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40219== by 0x1B6BA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40219== by 0x1B14F5: main (TestCreatingAndUsingNewCellBasedWritersTutorial.cpp:18) ==40219== ==40219== Open file descriptor 158: ==40219== ==40219== ==40219== Open file descriptor 155: ==40219== ==40219== ==40219== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingNewCellBasedWritersTutorial_valgrind.txt ==40219== ==40219== ==40219== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40219== ==40219== ==40219== ==40219== HEAP SUMMARY: ==40219== in use at exit: 618,348 bytes in 8,236 blocks ==40219== total heap usage: 2,451,794 allocs, 2,443,558 frees, 1,592,586,985 bytes allocated ==40219== ==40219== LEAK SUMMARY: ==40219== definitely lost: 0 bytes in 0 blocks ==40219== indirectly lost: 0 bytes in 0 blocks ==40219== possibly lost: 0 bytes in 0 blocks ==40219== still reachable: 56 bytes in 3 blocks ==40219== suppressed: 618,292 bytes in 8,233 blocks ==40219== Reachable blocks (those to which a pointer was found) are not shown. ==40219== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40219== ==40219== For lists of detected and suppressed errors, rerun with: -s ==40219== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)