==26273== Memcheck, a memory error detector ==26273== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26273== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26273== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26273== Parent PID: 24093 ==26273== ==26273== ==26273== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26273== Open file descriptor 12: ==26273== at 0xF93707D: pipe (pipe.c:29) ==26273== by 0x1971707D: ??? ==26273== by 0x14D1D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26273== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26273== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26273== by 0x10192D38: PetscInitialize (pinit.c:924) ==26273== by 0xF1F61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26273== by 0xF1F6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26273== by 0x2E35A2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26273== by 0x2DA099: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26273== by 0x2DE8F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26273== by 0x2DE796: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26273== by 0x2DEE2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26273== by 0x2D84B5: main (TestNodeBasedCellPopulation.cpp:19) ==26273== ==26273== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26273== at 0xF93BA1C: __open_nocancel (open64_nocancel.c:39) ==26273== by 0xF8BFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26273== by 0xF231822: ??? ==26273== by 0xF23196F: ??? ==26273== by 0x14DC26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26273== by 0x14DC2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26273== by 0x14D78922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26273== by 0x14D1D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26273== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26273== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26273== by 0x10192D38: PetscInitialize (pinit.c:924) ==26273== by 0xF1F61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26273== by 0xF1F6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26273== by 0x2E35A2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26273== by 0x2DA099: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26273== by 0x2DE8F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26273== by 0x2DE796: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26273== by 0x2DEE2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26273== by 0x2D84B5: main (TestNodeBasedCellPopulation.cpp:19) ==26273== ==26273== Open file descriptor 158: ==26273== ==26273== ==26273== Open file descriptor 155: ==26273== ==26273== ==26273== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==26273== ==26273== ==26273== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26273== ==26273== ==26273== ==26273== HEAP SUMMARY: ==26273== in use at exit: 618,348 bytes in 8,236 blocks ==26273== total heap usage: 30,290,675 allocs, 30,282,439 frees, 3,165,106,536 bytes allocated ==26273== ==26273== LEAK SUMMARY: ==26273== definitely lost: 0 bytes in 0 blocks ==26273== indirectly lost: 0 bytes in 0 blocks ==26273== possibly lost: 0 bytes in 0 blocks ==26273== still reachable: 56 bytes in 3 blocks ==26273== suppressed: 618,292 bytes in 8,233 blocks ==26273== Reachable blocks (those to which a pointer was found) are not shown. ==26273== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26273== ==26273== For lists of detected and suppressed errors, rerun with: -s ==26273== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)