==25588== Memcheck, a memory error detector ==25588== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25588== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25588== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==25588== Parent PID: 24093 ==25588== ==25588== ==25588== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25588== Open file descriptor 12: ==25588== at 0xEFF607D: pipe (pipe.c:29) ==25588== by 0x1971707D: ??? ==25588== by 0x13CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25588== by 0xEC01418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25588== by 0xEB9AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25588== by 0xD86ED38: PetscInitialize (pinit.c:924) ==25588== by 0xD7451D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25588== by 0xD745227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25588== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25588== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25588== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25588== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25588== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25588== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25588== ==25588== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25588== at 0xEFFAA1C: __open_nocancel (open64_nocancel.c:39) ==25588== by 0xEF7EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25588== by 0xEAFE822: ??? ==25588== by 0xEAFE96F: ??? ==25588== by 0x13D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25588== by 0x13D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25588== by 0x13D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25588== by 0x13CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25588== by 0xEC01418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25588== by 0xEB9AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25588== by 0xD86ED38: PetscInitialize (pinit.c:924) ==25588== by 0xD7451D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25588== by 0xD745227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25588== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25588== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25588== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25588== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25588== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25588== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25588== ==25588== Open file descriptor 158: ==25588== ==25588== ==25588== Open file descriptor 155: ==25588== ==25588== ==25588== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==25588== ==25588== ==25588== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25588== ==25588== ==25588== ==25588== HEAP SUMMARY: ==25588== in use at exit: 618,364 bytes in 8,237 blocks ==25588== total heap usage: 4,179,278 allocs, 4,171,041 frees, 1,770,414,532 bytes allocated ==25588== ==25588== LEAK SUMMARY: ==25588== definitely lost: 0 bytes in 0 blocks ==25588== indirectly lost: 0 bytes in 0 blocks ==25588== possibly lost: 0 bytes in 0 blocks ==25588== still reachable: 72 bytes in 4 blocks ==25588== suppressed: 618,292 bytes in 8,233 blocks ==25588== Reachable blocks (those to which a pointer was found) are not shown. ==25588== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25588== ==25588== For lists of detected and suppressed errors, rerun with: -s ==25588== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)