==25613== Memcheck, a memory error detector ==25613== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25613== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25613== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestParallelCellsGenerator -malloc_debug -malloc_dump -memory_info ==25613== Parent PID: 24093 ==25613== ==25613== ==25613== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25613== Open file descriptor 12: ==25613== at 0x10D1B07D: pipe (pipe.c:29) ==25613== by 0x1971707D: ??? ==25613== by 0x14C7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25613== by 0x10623418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25613== by 0x105BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25613== by 0xF290D38: PetscInitialize (pinit.c:924) ==25613== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25613== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25613== by 0x123D94: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25613== by 0x11ED1D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25613== by 0x1216E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25613== by 0x121580: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25613== by 0x121C17: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25613== by 0x11D0F5: main (TestParallelCellsGenerator.cpp:19) ==25613== ==25613== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25613== at 0x10D1FA1C: __open_nocancel (open64_nocancel.c:39) ==25613== by 0x10CA3BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25613== by 0x10520822: ??? ==25613== by 0x1052096F: ??? ==25613== by 0x14D246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25613== by 0x14D24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25613== by 0x14CDA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25613== by 0x14C7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25613== by 0x10623418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25613== by 0x105BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25613== by 0xF290D38: PetscInitialize (pinit.c:924) ==25613== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25613== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25613== by 0x123D94: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25613== by 0x11ED1D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25613== by 0x1216E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25613== by 0x121580: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25613== by 0x121C17: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25613== by 0x11D0F5: main (TestParallelCellsGenerator.cpp:19) ==25613== ==25613== Open file descriptor 158: ==25613== ==25613== ==25613== Open file descriptor 155: ==25613== ==25613== ==25613== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParallelCellsGenerator_valgrind.txt ==25613== ==25613== ==25613== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25613== ==25613== ==25613== ==25613== HEAP SUMMARY: ==25613== in use at exit: 618,483 bytes in 8,241 blocks ==25613== total heap usage: 54,317 allocs, 46,076 frees, 1,339,430,723 bytes allocated ==25613== ==25613== LEAK SUMMARY: ==25613== definitely lost: 0 bytes in 0 blocks ==25613== indirectly lost: 0 bytes in 0 blocks ==25613== possibly lost: 0 bytes in 0 blocks ==25613== still reachable: 120 bytes in 4 blocks ==25613== suppressed: 618,363 bytes in 8,237 blocks ==25613== Reachable blocks (those to which a pointer was found) are not shown. ==25613== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25613== ==25613== For lists of detected and suppressed errors, rerun with: -s ==25613== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)