==41036== Memcheck, a memory error detector ==41036== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41036== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41036== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestPottsBasedCryptSimulation -malloc_debug -malloc_dump -memory_info ==41036== Parent PID: 24093 ==41036== ==41036== ==41036== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41036== Open file descriptor 12: ==41036== at 0x1112407D: pipe (pipe.c:29) ==41036== by 0x1B3D807D: ??? ==41036== by 0x165EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41036== by 0x12EAB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41036== by 0x12E44D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41036== by 0x11B3BD38: PetscInitialize (pinit.c:924) ==41036== by 0x10A271D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41036== by 0x10A27227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41036== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41036== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41036== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41036== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41036== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41036== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==41036== ==41036== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41036== at 0x11128A1C: __open_nocancel (open64_nocancel.c:39) ==41036== by 0x110ACBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41036== by 0x10A62822: ??? ==41036== by 0x10A6296F: ??? ==41036== by 0x166916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41036== by 0x16691938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41036== by 0x16647922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41036== by 0x165EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41036== by 0x12EAB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41036== by 0x12E44D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41036== by 0x11B3BD38: PetscInitialize (pinit.c:924) ==41036== by 0x10A271D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41036== by 0x10A27227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41036== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41036== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41036== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41036== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41036== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41036== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==41036== ==41036== Open file descriptor 158: ==41036== ==41036== ==41036== Open file descriptor 155: ==41036== ==41036== ==41036== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCryptSimulation_valgrind.txt ==41036== ==41036== ==41036== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41036== ==41036== ==41036== ==41036== HEAP SUMMARY: ==41036== in use at exit: 618,444 bytes in 8,237 blocks ==41036== total heap usage: 46,840,634 allocs, 46,832,397 frees, 5,592,957,706 bytes allocated ==41036== ==41036== LEAK SUMMARY: ==41036== definitely lost: 0 bytes in 0 blocks ==41036== indirectly lost: 0 bytes in 0 blocks ==41036== possibly lost: 0 bytes in 0 blocks ==41036== still reachable: 136 bytes in 4 blocks ==41036== suppressed: 618,308 bytes in 8,233 blocks ==41036== Reachable blocks (those to which a pointer was found) are not shown. ==41036== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41036== ==41036== For lists of detected and suppressed errors, rerun with: -s ==41036== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)