==25960== Memcheck, a memory error detector ==25960== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25960== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25960== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsElement -malloc_debug -malloc_dump -memory_info ==25960== Parent PID: 24093 ==25960== ==25960== ==25960== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25960== Open file descriptor 12: ==25960== at 0xF51F07D: pipe (pipe.c:29) ==25960== by 0x1971707D: ??? ==25960== by 0x14CD04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25960== by 0x1117B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25960== by 0x11114D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25960== by 0xFE0BD38: PetscInitialize (pinit.c:924) ==25960== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25960== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25960== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25960== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25960== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25960== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25960== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25960== by 0x113E95: main (TestPottsElement.cpp:19) ==25960== ==25960== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25960== at 0xF523A1C: __open_nocancel (open64_nocancel.c:39) ==25960== by 0xF4A7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25960== by 0xF1A2822: ??? ==25960== by 0xF1A296F: ??? ==25960== by 0x14D756DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25960== by 0x14D75938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25960== by 0x14D2B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25960== by 0x14CD02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25960== by 0x1117B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25960== by 0x11114D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25960== by 0xFE0BD38: PetscInitialize (pinit.c:924) ==25960== by 0xF1671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25960== by 0xF167227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25960== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25960== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25960== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25960== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25960== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25960== by 0x113E95: main (TestPottsElement.cpp:19) ==25960== ==25960== Open file descriptor 158: ==25960== ==25960== ==25960== Open file descriptor 155: ==25960== ==25960== ==25960== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsElement_valgrind.txt ==25960== ==25960== ==25960== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25960== ==25960== ==25960== ==25960== HEAP SUMMARY: ==25960== in use at exit: 618,387 bytes in 8,239 blocks ==25960== total heap usage: 53,106 allocs, 44,867 frees, 1,339,237,257 bytes allocated ==25960== ==25960== LEAK SUMMARY: ==25960== definitely lost: 0 bytes in 0 blocks ==25960== indirectly lost: 0 bytes in 0 blocks ==25960== possibly lost: 0 bytes in 0 blocks ==25960== still reachable: 24 bytes in 2 blocks ==25960== suppressed: 618,363 bytes in 8,237 blocks ==25960== Reachable blocks (those to which a pointer was found) are not shown. ==25960== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25960== ==25960== For lists of detected and suppressed errors, rerun with: -s ==25960== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)