==39902== Memcheck, a memory error detector ==39902== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39902== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39902== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVolumeTrackingModifier -malloc_debug -malloc_dump -memory_info ==39902== Parent PID: 24084 ==39902== ==39902== ==39902== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39902== Open file descriptor 12: ==39902== at 0xF88A07D: pipe (pipe.c:29) ==39902== by 0x196FB07D: ??? ==39902== by 0x14D0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39902== by 0x114E8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39902== by 0x11481D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39902== by 0x10176D38: PetscInitialize (pinit.c:924) ==39902== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39902== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39902== by 0x20235E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39902== by 0x1FA77F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39902== by 0x1FDF12: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39902== by 0x1FDE0D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39902== by 0x1FE421: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39902== by 0x1F8F75: main (TestVolumeTrackingModifier.cpp:18) ==39902== ==39902== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39902== at 0xF88EA1C: __open_nocancel (open64_nocancel.c:39) ==39902== by 0xF812BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39902== by 0xF186822: ??? ==39902== by 0xF18696F: ??? ==39902== by 0x14DAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39902== by 0x14DAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39902== by 0x14D65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39902== by 0x14D0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39902== by 0x114E8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39902== by 0x11481D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39902== by 0x10176D38: PetscInitialize (pinit.c:924) ==39902== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39902== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39902== by 0x20235E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39902== by 0x1FA77F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39902== by 0x1FDF12: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39902== by 0x1FDE0D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39902== by 0x1FE421: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39902== by 0x1F8F75: main (TestVolumeTrackingModifier.cpp:18) ==39902== ==39902== Open file descriptor 158: ==39902== ==39902== ==39902== Open file descriptor 155: ==39902== ==39902== ==39902== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVolumeTrackingModifier_valgrind.txt ==39902== ==39902== ==39902== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39902== ==39902== ==39902== ==39902== HEAP SUMMARY: ==39902== in use at exit: 618,366 bytes in 8,237 blocks ==39902== total heap usage: 11,559,310 allocs, 11,551,073 frees, 3,065,805,478 bytes allocated ==39902== ==39902== LEAK SUMMARY: ==39902== definitely lost: 0 bytes in 0 blocks ==39902== indirectly lost: 0 bytes in 0 blocks ==39902== possibly lost: 0 bytes in 0 blocks ==39902== still reachable: 72 bytes in 4 blocks ==39902== suppressed: 618,294 bytes in 8,233 blocks ==39902== Reachable blocks (those to which a pointer was found) are not shown. ==39902== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39902== ==39902== For lists of detected and suppressed errors, rerun with: -s ==39902== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)