==39963== Memcheck, a memory error detector ==39963== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39963== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39963== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellKillerTutorial -malloc_debug -malloc_dump -memory_info ==39963== Parent PID: 24086 ==39963== ==39963== ==39963== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39963== Open file descriptor 12: ==39963== at 0x10E2807D: pipe (pipe.c:29) ==39963== by 0x196FB07D: ??? ==39963== by 0x14C6C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39963== by 0x10607418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39963== by 0x105A0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39963== by 0xF274D38: PetscInitialize (pinit.c:924) ==39963== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39963== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39963== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39963== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39963== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39963== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39963== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39963== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39963== ==39963== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39963== at 0x10E2CA1C: __open_nocancel (open64_nocancel.c:39) ==39963== by 0x10DB0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39963== by 0x10504822: ??? ==39963== by 0x1050496F: ??? ==39963== by 0x14D116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39963== by 0x14D11938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39963== by 0x14CC7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39963== by 0x14C6C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39963== by 0x10607418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39963== by 0x105A0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39963== by 0xF274D38: PetscInitialize (pinit.c:924) ==39963== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39963== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39963== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39963== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39963== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39963== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39963== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39963== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39963== ==39963== Open file descriptor 158: ==39963== ==39963== ==39963== Open file descriptor 155: ==39963== ==39963== ==39963== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellKillerTutorial_valgrind.txt ==39963== ==39963== ==39963== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39963== ==39963== ==39963== ==39963== HEAP SUMMARY: ==39963== in use at exit: 618,348 bytes in 8,236 blocks ==39963== total heap usage: 2,717,536 allocs, 2,709,300 frees, 1,508,128,772 bytes allocated ==39963== ==39963== LEAK SUMMARY: ==39963== definitely lost: 0 bytes in 0 blocks ==39963== indirectly lost: 0 bytes in 0 blocks ==39963== possibly lost: 0 bytes in 0 blocks ==39963== still reachable: 56 bytes in 3 blocks ==39963== suppressed: 618,292 bytes in 8,233 blocks ==39963== Reachable blocks (those to which a pointer was found) are not shown. ==39963== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39963== ==39963== For lists of detected and suppressed errors, rerun with: -s ==39963== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)