==26314== Memcheck, a memory error detector ==26314== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26314== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26314== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26314== Parent PID: 24086 ==26314== ==26314== ==26314== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26314== Open file descriptor 12: ==26314== at 0x10E2807D: pipe (pipe.c:29) ==26314== by 0x196FB07D: ??? ==26314== by 0x14C6C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26314== by 0x10607418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26314== by 0x105A0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26314== by 0xF274D38: PetscInitialize (pinit.c:924) ==26314== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26314== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26314== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26314== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26314== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26314== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26314== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26314== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==26314== ==26314== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26314== at 0x10E2CA1C: __open_nocancel (open64_nocancel.c:39) ==26314== by 0x10DB0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26314== by 0x10504822: ??? ==26314== by 0x1050496F: ??? ==26314== by 0x14D116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26314== by 0x14D11938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26314== by 0x14CC7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26314== by 0x14C6C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26314== by 0x10607418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26314== by 0x105A0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26314== by 0xF274D38: PetscInitialize (pinit.c:924) ==26314== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26314== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26314== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26314== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26314== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26314== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26314== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26314== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==26314== ==26314== Open file descriptor 158: ==26314== ==26314== ==26314== Open file descriptor 155: ==26314== ==26314== ==26314== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==26314== ==26314== ==26314== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26314== ==26314== ==26314== ==26314== HEAP SUMMARY: ==26314== in use at exit: 618,419 bytes in 8,240 blocks ==26314== total heap usage: 74,930 allocs, 66,690 frees, 1,344,323,280 bytes allocated ==26314== ==26314== LEAK SUMMARY: ==26314== definitely lost: 0 bytes in 0 blocks ==26314== indirectly lost: 0 bytes in 0 blocks ==26314== possibly lost: 0 bytes in 0 blocks ==26314== still reachable: 56 bytes in 3 blocks ==26314== suppressed: 618,363 bytes in 8,237 blocks ==26314== Reachable blocks (those to which a pointer was found) are not shown. ==26314== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26314== ==26314== For lists of detected and suppressed errors, rerun with: -s ==26314== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)