==25636== Memcheck, a memory error detector ==25636== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25636== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25636== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25636== Parent PID: 24153 ==25636== ==25636== ==25636== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25636== Open file descriptor 12: ==25636== at 0xF84807D: pipe (pipe.c:29) ==25636== by 0x196FB07D: ??? ==25636== by 0x14D0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25636== by 0x114A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25636== by 0x1143DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25636== by 0x10134D38: PetscInitialize (pinit.c:924) ==25636== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25636== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25636== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25636== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25636== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25636== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25636== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25636== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25636== ==25636== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25636== at 0xF84CA1C: __open_nocancel (open64_nocancel.c:39) ==25636== by 0xF7D0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25636== by 0xF186822: ??? ==25636== by 0xF18696F: ??? ==25636== by 0x14DAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25636== by 0x14DAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25636== by 0x14D65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25636== by 0x14D0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25636== by 0x114A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25636== by 0x1143DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25636== by 0x10134D38: PetscInitialize (pinit.c:924) ==25636== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25636== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25636== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25636== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25636== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25636== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25636== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25636== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25636== ==25636== Open file descriptor 158: ==25636== ==25636== ==25636== Open file descriptor 155: ==25636== ==25636== ==25636== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25636== ==25636== ==25636== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25636== ==25636== ==25636== ==25636== HEAP SUMMARY: ==25636== in use at exit: 618,487 bytes in 8,241 blocks ==25636== total heap usage: 69,394 allocs, 61,153 frees, 1,341,038,885 bytes allocated ==25636== ==25636== LEAK SUMMARY: ==25636== definitely lost: 0 bytes in 0 blocks ==25636== indirectly lost: 0 bytes in 0 blocks ==25636== possibly lost: 0 bytes in 0 blocks ==25636== still reachable: 120 bytes in 4 blocks ==25636== suppressed: 618,367 bytes in 8,237 blocks ==25636== Reachable blocks (those to which a pointer was found) are not shown. ==25636== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25636== ==25636== For lists of detected and suppressed errors, rerun with: -s ==25636== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)