==24839== Memcheck, a memory error detector ==24839== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24839== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24839== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestMutableVertexMesh -malloc_debug -malloc_dump -memory_info ==24839== Parent PID: 24153 ==24839== ==24839== ==24839== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24839== Open file descriptor 12: ==24839== at 0x815307D: pipe (pipe.c:29) ==24839== by 0x100CC07D: ??? ==24839== by 0xBA134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24839== by 0x7A1B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24839== by 0x79B4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24839== by 0x6686D38: PetscInitialize (pinit.c:924) ==24839== by 0x655E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24839== by 0x655E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24839== by 0x1B5143: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24839== by 0x1AE9BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24839== by 0x1B27F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24839== by 0x1B2696: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24839== by 0x1B2D2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24839== by 0x1ACDE5: main (TestMutableVertexMesh.cpp:19) ==24839== ==24839== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24839== at 0x8157A1C: __open_nocancel (open64_nocancel.c:39) ==24839== by 0x80DBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24839== by 0x7916822: ??? ==24839== by 0x791696F: ??? ==24839== by 0xBAB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24839== by 0xBAB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24839== by 0xBA6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24839== by 0xBA132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24839== by 0x7A1B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24839== by 0x79B4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24839== by 0x6686D38: PetscInitialize (pinit.c:924) ==24839== by 0x655E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24839== by 0x655E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24839== by 0x1B5143: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24839== by 0x1AE9BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24839== by 0x1B27F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24839== by 0x1B2696: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24839== by 0x1B2D2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24839== by 0x1ACDE5: main (TestMutableVertexMesh.cpp:19) ==24839== ==24839== Open file descriptor 158: ==24839== ==24839== ==24839== Open file descriptor 155: ==24839== ==24839== ==24839== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMesh_valgrind.txt ==24839== ==24839== ==24839== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24839== ==24839== ==24839== ==24839== HEAP SUMMARY: ==24839== in use at exit: 620,847 bytes in 8,240 blocks ==24839== total heap usage: 58,723 allocs, 50,483 frees, 1,340,004,163 bytes allocated ==24839== ==24839== LEAK SUMMARY: ==24839== definitely lost: 0 bytes in 0 blocks ==24839== indirectly lost: 0 bytes in 0 blocks ==24839== possibly lost: 0 bytes in 0 blocks ==24839== still reachable: 2,576 bytes in 3 blocks ==24839== suppressed: 618,271 bytes in 8,237 blocks ==24839== Reachable blocks (those to which a pointer was found) are not shown. ==24839== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24839== ==24839== For lists of detected and suppressed errors, rerun with: -s ==24839== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)