==26362== Memcheck, a memory error detector ==26362== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26362== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26362== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==26362== Parent PID: 24131 ==26362== ==26362== ==26362== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26362== Open file descriptor 12: ==26362== at 0xF97307D: pipe (pipe.c:29) ==26362== by 0x196FB07D: ??? ==26362== by 0x14D0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26362== by 0x115CF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26362== by 0x11568D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26362== by 0x1025FD38: PetscInitialize (pinit.c:924) ==26362== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26362== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26362== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26362== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26362== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26362== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26362== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26362== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26362== ==26362== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26362== at 0xF977A1C: __open_nocancel (open64_nocancel.c:39) ==26362== by 0xF8FBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26362== by 0xF186822: ??? ==26362== by 0xF18696F: ??? ==26362== by 0x14DAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26362== by 0x14DAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26362== by 0x14D65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26362== by 0x14D0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26362== by 0x115CF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26362== by 0x11568D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26362== by 0x1025FD38: PetscInitialize (pinit.c:924) ==26362== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26362== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26362== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26362== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26362== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26362== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26362== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26362== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26362== ==26362== Open file descriptor 158: ==26362== ==26362== ==26362== Open file descriptor 155: ==26362== ==26362== ==26362== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==26362== ==26362== ==26362== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26362== ==26362== ==26362== ==26362== HEAP SUMMARY: ==26362== in use at exit: 618,415 bytes in 8,240 blocks ==26362== total heap usage: 111,884 allocs, 103,644 frees, 1,346,973,275 bytes allocated ==26362== ==26362== LEAK SUMMARY: ==26362== definitely lost: 0 bytes in 0 blocks ==26362== indirectly lost: 0 bytes in 0 blocks ==26362== possibly lost: 0 bytes in 0 blocks ==26362== still reachable: 56 bytes in 3 blocks ==26362== suppressed: 618,359 bytes in 8,237 blocks ==26362== Reachable blocks (those to which a pointer was found) are not shown. ==26362== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26362== ==26362== For lists of detected and suppressed errors, rerun with: -s ==26362== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)