==26035== Memcheck, a memory error detector ==26035== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26035== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26035== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsMesh -malloc_debug -malloc_dump -memory_info ==26035== Parent PID: 24131 ==26035== ==26035== ==26035== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26035== Open file descriptor 12: ==26035== at 0xF54507D: pipe (pipe.c:29) ==26035== by 0x196FB07D: ??? ==26035== by 0x14CBD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26035== by 0x111A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26035== by 0x1113AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26035== by 0xFE31D38: PetscInitialize (pinit.c:924) ==26035== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26035== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26035== by 0x1387B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26035== by 0x13323D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26035== by 0x136272: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26035== by 0x136112: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26035== by 0x1367A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26035== by 0x131665: main (TestPottsMesh.cpp:19) ==26035== ==26035== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26035== at 0xF549A1C: __open_nocancel (open64_nocancel.c:39) ==26035== by 0xF4CDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26035== by 0xF186822: ??? ==26035== by 0xF18696F: ??? ==26035== by 0x14D626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26035== by 0x14D62938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26035== by 0x14D18922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26035== by 0x14CBD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26035== by 0x111A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26035== by 0x1113AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26035== by 0xFE31D38: PetscInitialize (pinit.c:924) ==26035== by 0xF14C079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26035== by 0xF14C0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26035== by 0x1387B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26035== by 0x13323D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26035== by 0x136272: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26035== by 0x136112: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26035== by 0x1367A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26035== by 0x131665: main (TestPottsMesh.cpp:19) ==26035== ==26035== Open file descriptor 158: ==26035== ==26035== ==26035== Open file descriptor 155: ==26035== ==26035== ==26035== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsMesh_valgrind.txt ==26035== ==26035== ==26035== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26035== ==26035== ==26035== ==26035== HEAP SUMMARY: ==26035== in use at exit: 618,383 bytes in 8,239 blocks ==26035== total heap usage: 79,288 allocs, 71,049 frees, 1,340,714,951 bytes allocated ==26035== ==26035== LEAK SUMMARY: ==26035== definitely lost: 0 bytes in 0 blocks ==26035== indirectly lost: 0 bytes in 0 blocks ==26035== possibly lost: 0 bytes in 0 blocks ==26035== still reachable: 24 bytes in 2 blocks ==26035== suppressed: 618,359 bytes in 8,237 blocks ==26035== Reachable blocks (those to which a pointer was found) are not shown. ==26035== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26035== ==26035== For lists of detected and suppressed errors, rerun with: -s ==26035== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)