==38515== Memcheck, a memory error detector ==38515== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==38515== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==38515== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestStepSizeException -malloc_debug -malloc_dump -memory_info ==38515== Parent PID: 24146 ==38515== ==38515== ==38515== FILE DESCRIPTORS: 9 open (3 std) at exit. ==38515== Open file descriptor 12: ==38515== at 0x4CB307D: pipe (pipe.c:29) ==38515== by 0xAEA407D: ??? ==38515== by 0x89BB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==38515== by 0x622C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38515== by 0x61C5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38515== by 0x4EBCD38: PetscInitialize (pinit.c:924) ==38515== by 0x48FA079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==38515== by 0x48FA0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==38515== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==38515== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==38515== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==38515== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==38515== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==38515== by 0x10D735: main (TestStepSizeException.cpp:19) ==38515== ==38515== Open file descriptor 8: /dev/shm/open_mpi.0000 ==38515== at 0x4CB7A1C: __open_nocancel (open64_nocancel.c:39) ==38515== by 0x4C3BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==38515== by 0x4934822: ??? ==38515== by 0x493496F: ??? ==38515== by 0x8A626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38515== by 0x8A62938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38515== by 0x8A18922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38515== by 0x89BB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==38515== by 0x622C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38515== by 0x61C5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38515== by 0x4EBCD38: PetscInitialize (pinit.c:924) ==38515== by 0x48FA079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==38515== by 0x48FA0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==38515== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==38515== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==38515== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==38515== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==38515== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==38515== by 0x10D735: main (TestStepSizeException.cpp:19) ==38515== ==38515== Open file descriptor 158: ==38515== ==38515== ==38515== Open file descriptor 155: ==38515== ==38515== ==38515== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestStepSizeException_valgrind.txt ==38515== ==38515== ==38515== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==38515== ==38515== ==38515== ==38515== HEAP SUMMARY: ==38515== in use at exit: 617,911 bytes in 8,239 blocks ==38515== total heap usage: 44,917 allocs, 36,678 frees, 1,338,500,891 bytes allocated ==38515== ==38515== LEAK SUMMARY: ==38515== definitely lost: 0 bytes in 0 blocks ==38515== indirectly lost: 0 bytes in 0 blocks ==38515== possibly lost: 0 bytes in 0 blocks ==38515== still reachable: 24 bytes in 2 blocks ==38515== suppressed: 617,887 bytes in 8,237 blocks ==38515== Reachable blocks (those to which a pointer was found) are not shown. ==38515== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==38515== ==38515== For lists of detected and suppressed errors, rerun with: -s ==38515== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)