==26402== Memcheck, a memory error detector ==26402== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26402== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26402== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26402== Parent PID: 24174 ==26402== ==26402== ==26402== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26402== Open file descriptor 12: ==26402== at 0xF0DD07D: pipe (pipe.c:29) ==26402== by 0x196FB07D: ??? ==26402== by 0x13C4F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26402== by 0xE9A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26402== by 0xE93CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26402== by 0xD610D38: PetscInitialize (pinit.c:924) ==26402== by 0xD4E6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26402== by 0xD4E60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26402== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26402== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26402== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26402== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26402== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26402== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26402== ==26402== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26402== at 0xF0E1A1C: __open_nocancel (open64_nocancel.c:39) ==26402== by 0xF065BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26402== by 0xE8A0822: ??? ==26402== by 0xE8A096F: ??? ==26402== by 0x13CF46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26402== by 0x13CF4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26402== by 0x13CAA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26402== by 0x13C4F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26402== by 0xE9A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26402== by 0xE93CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26402== by 0xD610D38: PetscInitialize (pinit.c:924) ==26402== by 0xD4E6079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26402== by 0xD4E60C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26402== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26402== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26402== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26402== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26402== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26402== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26402== ==26402== Open file descriptor 158: ==26402== ==26402== ==26402== Open file descriptor 155: ==26402== ==26402== ==26402== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26402== ==26402== ==26402== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26402== ==26402== ==26402== ==26402== HEAP SUMMARY: ==26402== in use at exit: 618,423 bytes in 8,240 blocks ==26402== total heap usage: 67,507 allocs, 59,267 frees, 1,340,324,567 bytes allocated ==26402== ==26402== LEAK SUMMARY: ==26402== definitely lost: 0 bytes in 0 blocks ==26402== indirectly lost: 0 bytes in 0 blocks ==26402== possibly lost: 0 bytes in 0 blocks ==26402== still reachable: 56 bytes in 3 blocks ==26402== suppressed: 618,367 bytes in 8,237 blocks ==26402== Reachable blocks (those to which a pointer was found) are not shown. ==26402== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26402== ==26402== For lists of detected and suppressed errors, rerun with: -s ==26402== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)