==25719== Memcheck, a memory error detector ==25719== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25719== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25719== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25719== Parent PID: 24291 ==25719== ==25719== ==25719== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25719== Open file descriptor 12: ==25719== at 0xEFDA07D: pipe (pipe.c:29) ==25719== by 0x196FB07D: ??? ==25719== by 0x13CA04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25719== by 0xEBE5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25719== by 0xEB7ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25719== by 0xD852D38: PetscInitialize (pinit.c:924) ==25719== by 0xD72A079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25719== by 0xD72A0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25719== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25719== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25719== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25719== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25719== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25719== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25719== ==25719== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25719== at 0xEFDEA1C: __open_nocancel (open64_nocancel.c:39) ==25719== by 0xEF62BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25719== by 0xEAE2822: ??? ==25719== by 0xEAE296F: ??? ==25719== by 0x13D456DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25719== by 0x13D45938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25719== by 0x13CFB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25719== by 0x13CA02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25719== by 0xEBE5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25719== by 0xEB7ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25719== by 0xD852D38: PetscInitialize (pinit.c:924) ==25719== by 0xD72A079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25719== by 0xD72A0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25719== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25719== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25719== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25719== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25719== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25719== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25719== ==25719== Open file descriptor 158: ==25719== ==25719== ==25719== Open file descriptor 155: ==25719== ==25719== ==25719== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25719== ==25719== ==25719== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25719== ==25719== ==25719== ==25719== HEAP SUMMARY: ==25719== in use at exit: 618,419 bytes in 8,240 blocks ==25719== total heap usage: 547,376 allocs, 539,136 frees, 1,345,099,282 bytes allocated ==25719== ==25719== LEAK SUMMARY: ==25719== definitely lost: 0 bytes in 0 blocks ==25719== indirectly lost: 0 bytes in 0 blocks ==25719== possibly lost: 0 bytes in 0 blocks ==25719== still reachable: 56 bytes in 3 blocks ==25719== suppressed: 618,363 bytes in 8,237 blocks ==25719== Reachable blocks (those to which a pointer was found) are not shown. ==25719== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25719== ==25719== For lists of detected and suppressed errors, rerun with: -s ==25719== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)