==42243== Memcheck, a memory error detector ==42243== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42243== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42243== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==42243== Parent PID: 24291 ==42243== ==42243== ==42243== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42243== Open file descriptor 12: ==42243== at 0x856E07D: pipe (pipe.c:29) ==42243== by 0x1432F07D: ??? ==42243== by 0xEE294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42243== by 0x9C69418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42243== by 0x9C02D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42243== by 0x88F9D38: PetscInitialize (pinit.c:924) ==42243== by 0x819B079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42243== by 0x819B0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42243== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42243== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42243== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42243== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42243== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42243== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42243== ==42243== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42243== at 0x8572A1C: __open_nocancel (open64_nocancel.c:39) ==42243== by 0x84F6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42243== by 0x81D5822: ??? ==42243== by 0x81D596F: ??? ==42243== by 0xEED06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42243== by 0xEED0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42243== by 0xEE86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42243== by 0xEE292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42243== by 0x9C69418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42243== by 0x9C02D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42243== by 0x88F9D38: PetscInitialize (pinit.c:924) ==42243== by 0x819B079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42243== by 0x819B0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42243== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42243== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42243== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42243== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42243== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42243== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42243== ==42243== Open file descriptor 158: ==42243== ==42243== ==42243== Open file descriptor 155: ==42243== ==42243== ==42243== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==42243== ==42243== ==42243== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42243== ==42243== ==42243== ==42243== HEAP SUMMARY: ==42243== in use at exit: 618,403 bytes in 8,239 blocks ==42243== total heap usage: 49,005 allocs, 40,766 frees, 1,338,876,110 bytes allocated ==42243== ==42243== LEAK SUMMARY: ==42243== definitely lost: 0 bytes in 0 blocks ==42243== indirectly lost: 0 bytes in 0 blocks ==42243== possibly lost: 0 bytes in 0 blocks ==42243== still reachable: 24 bytes in 2 blocks ==42243== suppressed: 618,379 bytes in 8,237 blocks ==42243== Reachable blocks (those to which a pointer was found) are not shown. ==42243== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42243== ==42243== For lists of detected and suppressed errors, rerun with: -s ==42243== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)