==25001== Memcheck, a memory error detector ==25001== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25001== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25001== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestToroidalHoneycombVertexMeshGenerator -malloc_debug -malloc_dump -memory_info ==25001== Parent PID: 24291 ==25001== ==25001== ==25001== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25001== Open file descriptor 12: ==25001== at 0x811107D: pipe (pipe.c:29) ==25001== by 0x100CB07D: ??? ==25001== by 0xBA094CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25001== by 0x7A1B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25001== by 0x79B4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25001== by 0x6686D38: PetscInitialize (pinit.c:924) ==25001== by 0x655E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25001== by 0x655E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25001== by 0x11A0CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25001== by 0x11394D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25001== by 0x116246: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25001== by 0x1160E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25001== by 0x11677D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25001== by 0x111D75: main (TestToroidalHoneycombVertexMeshGenerator.cpp:19) ==25001== ==25001== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25001== at 0x8115A1C: __open_nocancel (open64_nocancel.c:39) ==25001== by 0x8099BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25001== by 0x7916822: ??? ==25001== by 0x791696F: ??? ==25001== by 0xBAAE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25001== by 0xBAAE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25001== by 0xBA64922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25001== by 0xBA092DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25001== by 0x7A1B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25001== by 0x79B4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25001== by 0x6686D38: PetscInitialize (pinit.c:924) ==25001== by 0x655E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25001== by 0x655E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25001== by 0x11A0CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25001== by 0x11394D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25001== by 0x116246: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25001== by 0x1160E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25001== by 0x11677D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25001== by 0x111D75: main (TestToroidalHoneycombVertexMeshGenerator.cpp:19) ==25001== ==25001== Open file descriptor 158: ==25001== ==25001== ==25001== Open file descriptor 155: ==25001== ==25001== ==25001== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestToroidalHoneycombVertexMeshGenerator_valgrind.txt ==25001== ==25001== ==25001== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25001== ==25001== ==25001== ==25001== HEAP SUMMARY: ==25001== in use at exit: 618,291 bytes in 8,239 blocks ==25001== total heap usage: 48,583 allocs, 40,344 frees, 1,338,944,384 bytes allocated ==25001== ==25001== LEAK SUMMARY: ==25001== definitely lost: 0 bytes in 0 blocks ==25001== indirectly lost: 0 bytes in 0 blocks ==25001== possibly lost: 0 bytes in 0 blocks ==25001== still reachable: 24 bytes in 2 blocks ==25001== suppressed: 618,267 bytes in 8,237 blocks ==25001== Reachable blocks (those to which a pointer was found) are not shown. ==25001== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25001== ==25001== For lists of detected and suppressed errors, rerun with: -s ==25001== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)