==25023== Memcheck, a memory error detector ==25023== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25023== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25023== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestVertexMesh -malloc_debug -malloc_dump -memory_info ==25023== Parent PID: 24291 ==25023== ==25023== ==25023== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25023== Open file descriptor 12: ==25023== at 0x823C07D: pipe (pipe.c:29) ==25023== by 0x100CC07D: ??? ==25023== by 0xBA134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25023== by 0x7A1B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25023== by 0x79B4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25023== by 0x6686D38: PetscInitialize (pinit.c:924) ==25023== by 0x655E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25023== by 0x655E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25023== by 0x1437C7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25023== by 0x13DAFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25023== by 0x141414: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25023== by 0x1412B4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25023== by 0x14194B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25023== by 0x13BF25: main (TestVertexMesh.cpp:19) ==25023== ==25023== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25023== at 0x8240A1C: __open_nocancel (open64_nocancel.c:39) ==25023== by 0x81C4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25023== by 0x7916822: ??? ==25023== by 0x791696F: ??? ==25023== by 0xBAB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25023== by 0xBAB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25023== by 0xBA6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25023== by 0xBA132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25023== by 0x7A1B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25023== by 0x79B4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25023== by 0x6686D38: PetscInitialize (pinit.c:924) ==25023== by 0x655E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25023== by 0x655E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25023== by 0x1437C7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25023== by 0x13DAFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25023== by 0x141414: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25023== by 0x1412B4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25023== by 0x14194B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25023== by 0x13BF25: main (TestVertexMesh.cpp:19) ==25023== ==25023== Open file descriptor 158: ==25023== ==25023== ==25023== Open file descriptor 155: ==25023== ==25023== ==25023== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexMesh_valgrind.txt ==25023== ==25023== ==25023== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25023== ==25023== ==25023== ==25023== HEAP SUMMARY: ==25023== in use at exit: 620,843 bytes in 8,240 blocks ==25023== total heap usage: 97,232 allocs, 88,992 frees, 1,348,449,655 bytes allocated ==25023== ==25023== LEAK SUMMARY: ==25023== definitely lost: 0 bytes in 0 blocks ==25023== indirectly lost: 0 bytes in 0 blocks ==25023== possibly lost: 0 bytes in 0 blocks ==25023== still reachable: 2,576 bytes in 3 blocks ==25023== suppressed: 618,267 bytes in 8,237 blocks ==25023== Reachable blocks (those to which a pointer was found) are not shown. ==25023== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25023== ==25023== For lists of detected and suppressed errors, rerun with: -s ==25023== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)