==26005== Memcheck, a memory error detector ==26005== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26005== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26005== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==26005== Parent PID: 24329 ==26005== ==26005== ==26005== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26005== Open file descriptor 12: ==26005== at 0x1109C07D: pipe (pipe.c:29) ==26005== by 0x196FC07D: ??? ==26005== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26005== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26005== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26005== by 0xF611D38: PetscInitialize (pinit.c:924) ==26005== by 0xF4E9079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26005== by 0xF4E90C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26005== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26005== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26005== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26005== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26005== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26005== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==26005== ==26005== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26005== at 0x110A0A1C: __open_nocancel (open64_nocancel.c:39) ==26005== by 0x11024BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26005== by 0x1089B822: ??? ==26005== by 0x1089B96F: ??? ==26005== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26005== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26005== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26005== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26005== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26005== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26005== by 0xF611D38: PetscInitialize (pinit.c:924) ==26005== by 0xF4E9079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26005== by 0xF4E90C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26005== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26005== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26005== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26005== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26005== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26005== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==26005== ==26005== Open file descriptor 158: ==26005== ==26005== ==26005== Open file descriptor 155: ==26005== ==26005== ==26005== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithParabolicBoxDomainPdeModifier_valgrind.txt ==26005== ==26005== ==26005== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26005== ==26005== ==26005== ==26005== HEAP SUMMARY: ==26005== in use at exit: 618,364 bytes in 8,236 blocks ==26005== total heap usage: 4,548,704 allocs, 4,540,468 frees, 1,834,310,032 bytes allocated ==26005== ==26005== LEAK SUMMARY: ==26005== definitely lost: 0 bytes in 0 blocks ==26005== indirectly lost: 0 bytes in 0 blocks ==26005== possibly lost: 0 bytes in 0 blocks ==26005== still reachable: 56 bytes in 3 blocks ==26005== suppressed: 618,308 bytes in 8,233 blocks ==26005== Reachable blocks (those to which a pointer was found) are not shown. ==26005== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26005== ==26005== For lists of detected and suppressed errors, rerun with: -s ==26005== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)