==25949== Memcheck, a memory error detector ==25949== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25949== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25949== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25949== Parent PID: 24404 ==25949== ==25949== ==25949== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25949== Open file descriptor 12: ==25949== at 0x110DE07D: pipe (pipe.c:29) ==25949== by 0x196FC07D: ??? ==25949== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25949== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25949== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25949== by 0xF611D38: PetscInitialize (pinit.c:924) ==25949== by 0xF4E9079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25949== by 0xF4E90C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25949== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25949== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25949== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25949== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25949== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25949== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25949== ==25949== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25949== at 0x110E2A1C: __open_nocancel (open64_nocancel.c:39) ==25949== by 0x11066BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25949== by 0x1089B822: ??? ==25949== by 0x1089B96F: ??? ==25949== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25949== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25949== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25949== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25949== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25949== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25949== by 0xF611D38: PetscInitialize (pinit.c:924) ==25949== by 0xF4E9079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25949== by 0xF4E90C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25949== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25949== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25949== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25949== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25949== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25949== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25949== ==25949== Open file descriptor 158: ==25949== ==25949== ==25949== Open file descriptor 155: ==25949== ==25949== ==25949== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==25949== ==25949== ==25949== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25949== ==25949== ==25949== ==25949== HEAP SUMMARY: ==25949== in use at exit: 618,364 bytes in 8,236 blocks ==25949== total heap usage: 5,634,315 allocs, 5,626,079 frees, 1,933,058,292 bytes allocated ==25949== ==25949== LEAK SUMMARY: ==25949== definitely lost: 0 bytes in 0 blocks ==25949== indirectly lost: 0 bytes in 0 blocks ==25949== possibly lost: 0 bytes in 0 blocks ==25949== still reachable: 56 bytes in 3 blocks ==25949== suppressed: 618,308 bytes in 8,233 blocks ==25949== Reachable blocks (those to which a pointer was found) are not shown. ==25949== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25949== ==25949== For lists of detected and suppressed errors, rerun with: -s ==25949== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)