==41638== Memcheck, a memory error detector ==41638== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41638== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41638== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMatrixVentilationProblem -malloc_debug -malloc_dump -memory_info ==41638== Parent PID: 24446 ==41638== ==41638== ==41638== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41638== Open file descriptor 12: ==41638== at 0x81E107D: pipe (pipe.c:29) ==41638== by 0x107AB07D: ??? ==41638== by 0xC02A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41638== by 0x83DC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41638== by 0x8375D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41638== by 0x67A6D38: PetscInitialize (pinit.c:924) ==41638== by 0x667E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41638== by 0x667E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41638== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41638== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41638== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41638== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41638== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41638== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==41638== ==41638== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41638== at 0x81E5A1C: __open_nocancel (open64_nocancel.c:39) ==41638== by 0x8169BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41638== by 0x7A30822: ??? ==41638== by 0x7A3096F: ??? ==41638== by 0xC0CF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41638== by 0xC0CF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41638== by 0xC085922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41638== by 0xC02A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41638== by 0x83DC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41638== by 0x8375D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41638== by 0x67A6D38: PetscInitialize (pinit.c:924) ==41638== by 0x667E079: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41638== by 0x667E0C7: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41638== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41638== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41638== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41638== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41638== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41638== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==41638== ==41638== Open file descriptor 158: ==41638== ==41638== ==41638== Open file descriptor 155: ==41638== ==41638== ==41638== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMatrixVentilationProblem_valgrind.txt ==41638== ==41638== ==41638== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41638== ==41638== ==41638== ==41638== HEAP SUMMARY: ==41638== in use at exit: 618,407 bytes in 8,239 blocks ==41638== total heap usage: 137,452 allocs, 129,213 frees, 1,515,542,499 bytes allocated ==41638== ==41638== LEAK SUMMARY: ==41638== definitely lost: 0 bytes in 0 blocks ==41638== indirectly lost: 0 bytes in 0 blocks ==41638== possibly lost: 0 bytes in 0 blocks ==41638== still reachable: 24 bytes in 2 blocks ==41638== suppressed: 618,383 bytes in 8,237 blocks ==41638== Reachable blocks (those to which a pointer was found) are not shown. ==41638== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41638== ==41638== For lists of detected and suppressed errors, rerun with: -s ==41638== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)